Gene OSTLU_86880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_86880 
Symbol 
ID5001170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp8500 
End bp9216 
Gene Length717 bp 
Protein Length238 aa 
Translation table 
GC content60% 
IMG OID640416591 
Productpredicted protein 
Protein accessionXP_001417117 
Protein GI145345225 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGA GCGCGGATGG TGCGGAAAGC ATGACTCGTG TGTGCGCGTT GGAAGAGCTC 
CCACGCGGGG ATCGCAAGCT CGTTCGAGCG CTCGGCAAGA GCATTTTGAT GTTTTGGTAT
CGCGACACCG TGTTCGCTAT CGAATCTCGC TCGCCGGCCG AAGGAGCGTA CAGCGAAGGT
TTCGAAAAGG CACGTCTCAC GCAAGATGCC TGCATCGAGT GCCCGACGAC GAAGAGTAAA
TTTGATTTGA AGACGGGCGA GATCAAGGAG TGGTATCCGG AAAACCCGGT GTTGAAAGCG
TTGACGCCGC AAGACACGTG CCGCCCGATG GAGGTGTTCC CGGTGGAGGT CAGAGATGAT
GGTATTTATC TTGACGCCAA GAATGGCTCG CTCGGCCCGG GTTTCGTTGC CCCGATCGGT
TTGGGTGGTT CGAACACGTC TTTGGAGAAC AACAACGTCT TCGCCGTCGA GACGCCGATG
TACGTGGAGG GTGAAGGTAT CGGCGGCTCC ATGGCATCCG GAGGTGACAG CTCTGGTAAG
ATGGACGCAA GCCAACTCGG CGGCGCGATT GCGGTCGCCG GCGTCGTCGC AGTCGCCGGT
ACGGGAGCGT GCCTTTACTT TGAGAACTTT TATGCGTTGG CCGCGCTGTG GATCGCCGGC
TTTGCCGCGG CAGCCGGCGT GGCGTTGAAG ACCACGGGCG CGCTCGACGA GGAGTAG
 
Protein sequence
VSASADGAES MTRVCALEEL PRGDRKLVRA LGKSILMFWY RDTVFAIESR SPAEGAYSEG 
FEKARLTQDA CIECPTTKSK FDLKTGEIKE WYPENPVLKA LTPQDTCRPM EVFPVEVRDD
GIYLDAKNGS LGPGFVAPIG LGGSNTSLEN NNVFAVETPM YVEGEGIGGS MASGGDSSGK
MDASQLGGAI AVAGVVAVAG TGACLYFENF YALAALWIAG FAAAAGVALK TTGALDEE