| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49448 |
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| Symbol | |
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| ID | 5001220 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009358 |
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| Strand | + |
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| Start bp | 535535 |
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| End bp | 537113 |
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| Gene Length | 1579 bp |
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| Protein Length | 270 aa |
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| Translation table | |
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| GC content | 64% |
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| IMG OID | 640416641 |
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| Product | predicted protein |
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| Protein accession | XP_001417276 |
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| Protein GI | 145345564 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5540] RING-finger-containing ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0291569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGT CGCTCGCTTC GATCGGCATG CGTTCGGTGG TTGACTCGTA CCTTTGCCTC
GCCCATCTCA CGGGTGGCAT CCTCGTGGAC GATTTATTCA TGCCGCTGGC GCTCGTGGCG
CTGTGCTACT TCGTGCTGTT TAGTATACTC GAGATGCGCC TGCTCATCGC CGCGTGGCGC
GCGCGCACGC CCGATATTAC CAACTGGATA GAACTTCGAG TGAACCTCGG TGCGGTGTAC
TCGAGATTTT ACGCCGGATT CATCTCGGGT CTCTTTGCGA TGTATTGGCT CTCCGATCGA
TTCATCATCT TCTTGTTGCT CGCGAACTCG TATTGGGTTC CTCAAATCGT ACGCAACGCC
TACCACAACC ACCGACAAGC GTTGAAGCCT TGGTACGTTG TGACGACGTC GTTCATGCGT
TTATCGGCGC CGCTGTACGT GCTCGGGTGT CCGTCCAACT TTCTGAAGAT ACGTCCGAAC
TACTTTCACT GCGCGGTGAT GGTCGCGTGG ACGACGGCGC AGACGGCGAT GTTGCTCGCG
CAGTATTACA TCAATCCTAG ATACGGATTC CCCATCGGCA TTTTCCCCGA AGTGTACGAC
TATCATAGGA AAGTATCCGA AGAAGTCCTC GCGCAGTGCG GCGTCGTCGA TGAAGACGAA
GACGACGAGG CGCGCGAACG AGACGTCGAA ATGGGCGACG TCGCCGCCGG TCCCGACTGC
GTGATTTGCA TGAATCCAGT CAAGTTCCGC GCCGTGCACG ATCGCATGGT GACACCGTGT
AACCATTTTT TCCACACAAA GTGCTTGATG CGGTGGATGG ACATCAAGCA GGAGTGTCCG
ACGTGCCGCG GCGCGTTGCC GCCGATGTAA AGGCGCGTCC GACGTCGTTC GCCCTTGTAA
TCCTAGCCTC TAGTCCTTAG CGAACCACCG CACAGCGACG CGCGCGCGCG ACGCACCCGC
GTCGCCGAAA CCAACGCGAC CGATGACGTC GTTCATCGGC GCCGTCGCGC TCTTCGCGCT
CGGCTGCGCC ATAGCCGCCG CGCTGCCCCG TCCTCTCGAG GAGGACAAAC GAACGTGGTC
GAGAAAAAGC AAACGTCCCA AGAGTCCGAG TCGCGTCGGC CGCCGCCGCT GAGCGCGCGC
CGGTCGAACG GTTCGACGAC GCGCGCGCGA ACGCCACCCC GCGCGCGAAT CGCGCGCGCG
TTCGAACGCG CACCGGAACG ACGTCTCGCG TCTTCGCGCC CGCGCGTCAC GCGCCGCCGC
CGCCGCCGTC CGCGCCCTCG TCCTCCTCCG CGCACTCGTA CGCGCACCCC TCGCGCCCGC
GCGGGCGCGA CTCCGCGTCC GCCCCGTTCG CGTCCACGAC CGGCGTCCAC TTGCGAAACG
TCGTCTTCGT CTTCTCCGTC TGTCCCTCGC GCGTCTCGCC CTCGACCCAC CTGTCGTCGC
CCGATCGTCG CCGTCAGTCC TCGCGTCGCG CCGTCGCGCG CGCGTCGCGT CGCGCACCTC
ATCTCCCACG CCTTGACGCG TCCCTCGCGC GCGGCGACGA CGTCGCGCGC GTTCCGCGCC
TCGAGTCGCG AGCCGCGCG
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| Protein sequence | MRMSLASIGM RSVVDSYLCL AHLTGGILVD DLFMPLALVA LCYFVLFSIL EMRLLIAAWR
ARTPDITNWI ELRVNLGAVY SRFYAGFISG LFAMYWLSDR FIIFLLLANS YWVPQIVRNA
YHNHRQALKP WYVVTTSFMR LSAPLYVLGC PSNFLKIRPN YFHCAVMVAW TTAQTAMLLA
QYYINPRYGF PIGIFPEVYD YHRKARERDV EMGDVAAGPD CVICMNPVKF RAVHDRMVTP
CNHFFHTKCL MRWMDIKQEC PTCRGALPPM
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