Gene OSTLU_49408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_49408 
Symbol 
ID5001420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp10135 
End bp12589 
Gene Length2455 bp 
Protein Length440 aa 
Translation table 
GC content57% 
IMG OID640416841 
Productpredicted protein 
Protein accessionXP_001417399 
Protein GI145345824 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCGAAGATT CCGCGGTGGT TGTCGGCGCC GAGTTTTCCG GTAAGGTGAA GCGCATCCAA 
GACTACGGTT GCTTTGTGGA CTTCGGCGCC AAGAACGACG GCTTGGTGCA CATCTCCGAA
CTTCAAGATG GCTTCGTCGA AAGCGTCGCG TCTGTCGTGT CTGAAGACCA AGAAGTCAAG
GTTTGGATCA AGGAAATCAA GGAAAACAAG ATTTCTTTGA CGATGAAGAA GCCGCCGACG
GAGGAAGAGC TCGCGGCTGC CAAGTCTGAG CAAGAAGCCA AGTTTGCGGC GCGACAAGAA
TACAAAAAGG CTCAAGACGC CAAGGCACAA GCGGTGAAGG GCTTGAAGAA GGGCACGAAG
GTTGAGGGCG AAGTCATGTC CATTCAACCA TTCGGTGCTT TCGTTCAAGT TGCCGAGGGT
GTCGAAGGTT TGGTGCACGT CACCGAGCTC TCTGACGACT TCAACGTCAA GGTTGAAGAC
TTCTGCAAGG TTGGCGAAAA GGTCACCGTC ACCATCATTG GCATCGATGG CGCCAAGGTC
AAGCTTTCCA TGAAGGAAAA GCTCGATGTA CGTATTCGTT CGATTGCGTC ACCACCGCTC
GAATCATGTT TTTCTCGAGT CGTATCACTT TCTGATTATT TTTGAAGAGC GCGCCGCGTT
GAGAAACTGA CCATTCGTCG CCCTTTCGCT TTGATTCACG CAGTTGTCTG AAATGAACGC
TGAAGCGTCC GCTGCTTTCG ACGGTGCCGT AAGTGCGATG GAGTTTGCGC TCAAGAGCAA
GGGTATCTCC GCGGACATGT TTCCGGCCGG CTCTTCCGCC CCGGCTGCCG CTCCCGCTGC
TGAGGCTCCG AAAGAGGTGA GTTCATAAGC AACGTCGCGG CTTGAGTTAT CTCATCCGCC
GTTGTAATAA CCTAGTGCTA TTTATTTTGG AACCCTTTTA CTCACCTACT TTAAATCTAC
AGGCTGCTCC GGCTCCCGCC GCTCCGGCTG CCGTCGCCGC CGCGGCTCCG GTTGAAGAAA
AGAAGCCCGC CGCCGCCGCC GCTGGCGGCA TCTCCGCCGC CACGGTGAAG CAGCTTCGCG
ACTCCACCGG CTGCGGTATG ATGGATTGCA AGAAGGCGCT TCAAGAAAAC AACGGTGACA
TCGCCGAAGC CACGGCGTGG TTGCGCAAGA AGGGTATGGC GTCTGCGGAC AAGAAGGCGA
GCCGCATCGC CGCCGAGGGC GCCGTCGTCT CTTACATCCA CGCGGGCTCG CGCATCGGCG
TCTTGCTCGA GCTCAACTGC GAGACCGACT TTGTCGCTCG CGGTGACAGA TTCAAGGAGC
TCGCGCAAGA TCTCGCCATG CAAGTCGCTG CGTGCCCGGA AGTTGAGTAC ATCAGCCCGT
CCGACGCCGA CCAAGAAATG GTTGCGCGCG AACGCGACAT CGAGATGCAG AAGGAGGACC
TCTTGTCCAA GCCGGAGAAC ATTCGCGAAA AGATCGTCAA CGGCCGCATC GAAAAGTTGG
TGAACGAGAA GGCGCTCATC ACCAAGGATT TCATCAAGAA CACGGACGTG ACCGTCGAAG
ATCTCGTGAA GACTGCGACC GCGGAGATTG GTGAGAAGAT CTCCATCCGT CGCTTCGCGC
GCTTCAACCT CGGTGAAGGC ATCGAGAAGC GTGTTGACGA CTTCGCCGCT GAAGTTGCCG
CGCAAACGCA AGTGAAGGCT GCCGCTCCGG CTGCGGAACC GAAAGAAGAA AAGAAAGAGG
AGAAGAAGGA AGAAGACGCG CCGTCTGTCA AGGTTGACGC CAAGCTCGTG AAGCAGCTTC
GCGACTCCAC CGGCTGCGGT ATGATGGATT GCAAGAAGGC GCTCGCGCAG AACAACAACA
GCGTCGAGGA AGCCACGGCG TGGTTGCGCA AGAAGGGTAT GGCGTCTGCG GACAAGAAGG
CGAGCCGCAT CGCCGCCGAG GGCGCCGTCG TCTCTTACAT CCATGCGGGC TCGCGCATCG
GCGTCTTGCT CGAGCTCAAC TGCGAGACCG ACTTTGTCGC TCGCGGTGAC AGATTCAAGG
AGCTCGCGCA AGATCTCGCC ATGCAAGTCG CTGCGTGCCC GGAAGTTGAG TACATCAGCC
CGTCCGACGC CGACCAAGAA ATGGTTGCGC GCGAACGCGA CATCGAGATG CAGAAGGAGG
ACCTCTTGTC CAAGCCGGAG AACATTCGCG AAAAGATCGT CAACGGCCGC ATCGAAAAGT
TGGTGAACGA GAAGGCGCTC ATCACCAAGG ATTTCATCAA GAACACGGAC GTGACCGTCG
AAGATCTCGT GAAGACTGCG ACCGCGGAGA TTGGTGAGAA GATCTCCATC CGTCGCTTTG
AACGCTTCAA CCTCGGTGAA GGCATCGAAA AGCGCAACGA AGACTTCGCC GCTGAAGTCG
CGGCTCAAAT GGGCAAGTAA TTGGCAGCGT GCGCGCATTA GGAAAGAGCT ATTCT
 
Protein sequence
MMDCKKALQE NNGDIAEATA WLRKKGMASA DKKASRIAAE GAVVSYIHAG SRIGVLLELN 
CETDFVARGD RFKELAQDLA MQVAACPEVE YISPSDADQE MVARERDIEM QKEDLLSKPE
NIREKIVNGR IEKLVNEKAL ITKDFIKNTD VTVEDLVKTA TAEIGEKISI RRFARFNLGE
GIEKRVDDFA AEVAAQTQVK AAAPAAEPKE EKKEEKKEED APSVKVDAKL VKQLRDSTGC
GMMDCKKALA QNNNSVEEAT AWLRKKGMAS ADKKASRIAA EGAVVSYIHA GSRIGVLLEL
NCETDFVARG DRFKELAQDL AMQVAACPEV EYISPSDADQ EMVARERDIE MQKEDLLSKP
ENIREKIVNG RIEKLVNEKA LITKDFIKNT DVTVEDLVKT ATAEIGEKIS IRRFERFNLG
EGIEKRNEDF AAEVAAQMGK