| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49379 |
|---|
| Symbol | |
|---|
| ID | 5001153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 120520 |
|---|
| End bp | 122753 |
|---|
| Gene Length | 2234 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640416574 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417151 |
|---|
| Protein GI | 145345296 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5158] Proteins involved in synaptic transmission and general secretion, Sec1 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0102276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCT CGGAGGCGCA CAAGGAATAC GTCAAGCGCA TGCTCGACGT CGCGAAGGGC
GGCATGAAGG CCCTGGTGTG CGATCCGGTG ACGGTGCGCG CGATCGACGA CTCAACGACT
TTGCGATTTG ACGACGCATT CGACGCGACG GCGACGCGAT CGAGGCACTG ACGGCGAATT
CGTTCGACGC AGGTGAACAT ATTGAGTGTG GTGATGTCAC AGAGCGAAGT TCTCGCGCGT
GAGGTGCGTG TGCGAGGACG TGGGCGCGCG ATTTCGGAAT GTTGAAAGTG ACAAGTGACG
CGTTCGAGCG CGCAAAGCGC GACGTCGCGT TCGAGCGCGC GAAGCGCCGA TTCGAGGCGC
GAGACTGATG CTCGTATATT TTGTGCGCGT TCTAGGTGTT TTTGATCGAG CAGTTGCACG
AGCGCCCGCA CGAGGAGATG CCGCACCTGA AGGCGGTGGT GTTCGTGAGG CCGACGAGGG
AAAACGTGCG AACGCTCGGG AAACAGTTGA AACAGCGGAC GTACGGAGAG TATCACGTCT
TCTTTTCGAA CGTGTGCCCA GAAGGATTGC TGCAGGAGCT CGCGGCGGAG GATGACGACG
AGCTCGTGGT GCAGGTGCAA GAGTATTACG CGGACGCGAC GGCGGTGGAT CGAAACACGT
TTGCGCTAGA GTTGGGAGAG TCGAATAGCG CGCTCATGAA CCCGGGGCAG TGGTCTCGCA
GCGTGGGGAT GGCGGTAGAT AGATGTGTGG AAGGAATCAC GAGCGTGTTG CTGTCGCTGA
AGCGTAGACC GTTCATTAGG CACCAGCGCT CGAGTGAGGC GGCGAGACGA CTGGCGGCGG
ACGTCGCGAG AGTGGTGTAC GAGCAAGAGG CGGGATTGTT TGATTTCCCT CGCGCGGATG
GCGCGGCGCA TTTATTAGTT CTCGATCGTT TCGACGACGC CGTCACGCCG CTGCTGTCGC
AGTGGACCTA TCAAGCCATG GTGCACGAGA TTTTTGGCAT TTCGAGCACG AACAGAGTAG
ATTTACGGCA CGTCAAGGCG CTGAGCAAAG AGCTTCGTGA ACTCGTGCTG AGCGCGCGCG
AGGATGCATT TTTCGCAGAG AACATGTACG CCAACTACGG CGATTTGGGG GCGAGCGTCA
AGGCTTTGGT GGATGAGTTC CAACAACAGA CAAAGATGAG CAAGAAGATT GAATCCATAG
ACGACATGGC GCGATTCGTG GAATCGTACC CAGAGTTTAG GGCGAAGAGT GGAAATGTCT
CCAAACACGT CGCGCTGATG TCCGAACTGA GCTCTGTGAT ATCACAGCGG CGTCTGATGG
CGGCGTCGCA GGTTGAACAA GAGGTTGTGT GCGGCACGGA TCGCGCCGGC GCGTTTACGC
AAGTCGTCGA CGCGCTACGC AATCCACAGC TTCTAGAGGA GGAGCGACTG AAACTCGTGC
TGCTGTTCGC GTTGCGCTAC GAAAATGAGC AAAGCCAAAT CGCAGACTTG ACGGAAATTC
TCATGCAACA AGGCGTCAGT CGCTCGCGCA TCGGACTCGT GCGCACAATT TTAAAGCACG
GCGGGGAAGC CGCGCGCACG GGCGATTTGT TCGGCAACCG CTCATTCCTC GGCCGTGCGA
GCAAGGTCGT CGGCAGTCTC AAAGGCGTCG AAAACGTCTA CACGCAGCAC CAACCGCTGT
TAAGTTCGAC GATTCAATCC GCCGCCAAGG GCTCGCTGAA AAATGAAGAT TATCCATTCG
TCGGCCCGTC GCCCAACGGC GCCGCCGCCG CCAAGCCCAC CGAACTCATC GTCTTCATCA
TCGGTGGCAT TTGCTACGAA GAGACCAAGG TATGCGAGCA GTTTAATGCC CTCAAAACCG
GTGTCACCGT CGTCCTCGGC GGCTCCACCG TCTTAAACGC GCGAGCCTTC GTCGACGATT
TACGAAAGCT TCAAGAAGCA GGCGGATAGC CGACATCGAG TCGCCGACGC CGAGCCGCCG
ACGGCGTCCC CACCACCCCC GCGAACCTCG CGAACGACAC CACCCTCCAA ATGAATAAAA
TATCGCGTCA TTATCGCTCC GTTCTCGTCT GGTCCGTCTT CGCTCTCGCG CGCGACGGGC
GTCGGGTCGC CTCGGGTTTG CCGGCTCGCG GTCGCCTCGG CCTCGCCTCA CACCTCGTCC
GCGATGTCCG ACGCCGAGCC CTCGGCTCGG TCCGGACCGA GCGATGTCCG TCACGCGCGC
AACCGCAGCC TCAG
|
|---|
| Protein sequence | MDLSEAHKEY VKRMLDVAKG GMKALVCDPV TVNILSVVMS QSEVLAREVF LIEQLHERPH
EEMPHLKAVV FVRPTRENVR TLGKQLKQRT YGEYHVFFSN VCPEGLLQEL AAEDDDELVV
QVQEYYADAT AVDRNTFALE LGESNSALMN PGQWSRSVGM AVDRCVEGIT SVLLSLKRRP
FIRHQRSSEA ARRLAADVAR VVYEQEAGLF DFPRADGAAH LLVLDRFDDA VTPLLSQWTY
QAMVHEIFGI SSTNRVDLRH VKALSKELRE LVLSAREDAF FAENMYANYG DLGASVKALV
DEFQQQTKMS KKIESIDDMA RFVESYPEFR AKSGNVSKHV ALMSELSSVI SQRRLMAASQ
VEQEVVCGTD RAGAFTQVVD ALRNPQLLEE ERLKLVLLFA LRYENEQSQI ADLTEILMQQ
GVSRSRIGLV RTILKHGGEA ARTGDLFGNR SFLGRASKVV GSLKGVENVY TQHQPLLSST
IQSAAKGSLK NEDYPFVGPS PNGAAAAKPT ELIVFIIGGI CYEETKVCEQ FNALKTGVTV
VLGGSTVLNA RAFVDDLRKL QEAGG
|
|---|
| |