| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_45590 |
|---|
| Symbol | RPL10a |
|---|
| ID | 5001339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 524778 |
|---|
| End bp | 525991 |
|---|
| Gene Length | 1214 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640416760 |
|---|
| Product | Ribosomal protein L10a, component of cytosolic 80S ribosome and 60S large subunit |
|---|
| Protein accession | XP_001417269 |
|---|
| Protein GI | 145345549 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00106944 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCGTCAGTC GATTAATAGC ACAGATGAGG TGCGGGCGCG AGCGAAATGT CGTGGGAATA
TTTACGCGTC GTCGTCGTCG CGCGCGTGCG GCGTGAAGCG TCGCGCGCGT CGTGCGGAGG
GGCGACGATG CGCCGCGCGC GCGAAACCCT ACTCGATCGC TCGAGACCGA CGAAGCCGAC
GTCGCGCGCG CGATGCGACG ACCCGCGGCC GCGCGCGCGG CGCTCGATCG ATGCGCGCGA
TGATTGTTCA CCGACTGACG ACGAATGCAC GCTCGTTCAC GCGCGCGCAG CAAGCTCAAC
ACCGATACCC TCAAGGAAGG CGTCACGTTC CTCTTGGAAA AGTCCAAGGA GAAGCCGCGC
AAGTTCGTGG AGACGATTGA ACTTCAAATT GGTTTGAAGA ACTATGATCC GCAAAAGGAC
AAGCGTTTCA ACGGCACCGT CTCGTTGCCG GTGATTCCGC GCCCGAAGCT CAAGATGTGC
ATCTTGGGCG ACGCCAAGCA CTGCGAAGAG GCGACCGGGA ACGGCATCGA CTCGATGGAC
GTCGAGGCGT TGAAGAAGCT CAACAAGAAC AAGAAGCTCA TCAAGAAGCT CGCGAAGAAG
TACCAACACT TCTTGGCGTC GGAGTCTGTG ATTAAGCAAA TTCCTCGTCT CCTTGGTCCG
GGTTTGAACA AGGCCGGTAA GTTCCCGACG CTCGCCACTC ACAACGAGCC GCTCGAGAAC
AAGATCAACG ACGTCAAGTC CCAAGTCAAG TTCCAGCTTA AGAAGGTTCT TTGCTTGGCT
GTCGCCGTCG GTCACGTCGA AATGACGGAG AAGGAGTTGT TTATCAACAT CCAAATGTCC
GTCAACTTCT TGGTCTCTTT GTTGAAGAAG AACTGGCAAA ACGTCAAGTC TTTGTACATC
AAGACCACGA TGGGCCCGCC CTTCCGCTTG TTCTAAGCGA CCACTTCCGA TGAAGCATCA
TCCCTGAAGT CGCGCGTTTA CGCGCGACTT TAGCGTACAC CAAGTCACCG CAGCCACACT
TGAGCCCCAC TGGGACCATG CCCAGTGAAA CGGCGTAGCT ACGGGAGTCG TTGGTAGCTG
CTTAACCGCA GCGACGCTTG CTTTGTCTGT TTTAATCAAA CTTCGTCTGG CAACTTGCCA
GTCGTTGTGA CGACGCGAAG AGACTAAAAT ACTACATAAA CAACGTTGTT ATGAAACACC
AATCTCGTAA TGAC
|
|---|
| Protein sequence | MSKLNTDTLK EGVTFLLEKS KEKPRKFVET IELQIGLKNY DPQKDKRFNG TVSLPVIPRP
KLKMCILGDA KHCEEATGNG IDSMDVEALK KLNKNKKLIK KLAKKYQHFL ASESVIKQIP
RLLGPGLNKA GKFPTLATHN EPLENKINDV KSQVKFQLKK VLCLAVAVGH VEMTEKELFI
NIQMSVNFLV SLLKKNWQNV KSLYIKTTMG PPFRLF
|
|---|
| |