Gene OSTLU_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_3993 
Symbol 
ID5001359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp425101 
End bp425919 
Gene Length819 bp 
Protein Length273 aa 
Translation table 
GC content53% 
IMG OID640416780 
Productpredicted protein 
Protein accessionXP_001417498 
Protein GI145346026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00685542 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCGAGG TGGTTAGAAA AGTCGCGCGA AACCGCGAAG TTCTCGCGGC GGTGAGTAAC 
AAGAACATCT TTCACATGCT TGAGCTGTAC ATCGATGGGT TGAAGCGGAC GGGGATCACG
AACTACGTCA TTGTGGCTCT CGATAGCGAG ACTGCGGATT GGTGCAAGCA GCGCGAGGTG
CCGTACTATC ACCGCGAGCT AACGTCAATC ACAGGTAGTA CTGACAATCA CGCGACGTCG
GGATTAAAGT TCCGAGTGTT GAATGAATTC GTATCCACTG GGACGTCGGT GTTGTTATCG
GATGTGGATG TGGTTTGGAT GCAAGATCCT TTCGCTGCAG GTGAGAGCGC GAGAAACAAA
CGCTTGATCT ATCGAGACGC CGACGTCGAA GGAATGACCG ATGGATGGGA CGATCCGACG
TCGTACGGTT TCTCATGGAA CGGTCAGCGA CGGTTGATCG CACGGAATAG CGGGTTGTTT
TTCGTCGCGG CGACGCACGA GACGAAGGCG ATGATGTCAA GACTCGCCGA ACGCATGGCG
TCGGAGAAGA ATACGTGGGA CCAGACGGCG TACAACGAGG AGCAGGTGTA TCTCTGGGGT
CAGTCCAAGC ATAAGAAGTA TTCTGGAACG AGCCAGCGCG TGATGAACTA CATGTGTTTC
CAGAATTCCA AGTACATGTT CCGCTTCATG CGTTACGACG AGGATCTGTA CCCAGATCAC
CGACCCGCAA GCGTGCACAT CAACTACCAC CCTGAAAAGC CCGATCGCAT GGTGTCCGTC
ATAGCGCAGT ACTGGAAAGG TGAAGCAAAT GCGATTGAT
 
Protein sequence
LCEVVRKVAR NREVLAAVSN KNIFHMLELY IDGLKRTGIT NYVIVALDSE TADWCKQREV 
PYYHRELTSI TGSTDNHATS GLKFRVLNEF VSTGTSVLLS DVDVVWMQDP FAAGESARNK
RLIYRDADVE GMTDGWDDPT SYGFSWNGQR RLIARNSGLF FVAATHETKA MMSRLAERMA
SEKNTWDQTA YNEEQVYLWG QSKHKKYSGT SQRVMNYMCF QNSKYMFRFM RYDEDLYPDH
RPASVHINYH PEKPDRMVSV IAQYWKGEAN AID