| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_36933 |
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| Symbol | |
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| ID | 5001476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009358 |
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| Strand | + |
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| Start bp | 558885 |
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| End bp | 561683 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640416897 |
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| Product | predicted protein |
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| Protein accession | XP_001417281 |
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| Protein GI | 145345575 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00575996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGG GTGACCCGTC GGAGAAGACG AAGAAGCGGT ACCAGGCGCG CGTGGACGCG
GTGAACGCGC TCGGGGCGAG GACGAAGGCG CTGAGCGACG ACGAGCTGCG GGCGAAGACG
GAGGAATTCC GCGAGCGATT GCGACGAGGC GAGAGCGAGG ACGATTTACT CGTCGAGGCG
TTCGCGGTGG TTCGAGAGGC GGCGGATCGC GTGCTCGGGC TGCGGCCGTT CGACGTGCAA
CTCATCGGGG GGATGATTTT GCACGAAGGG CAAATCGCGG AGATGCGCAC GGGGGAGGGG
AAGACGCTGG TGTCGGCGTT GCCGGCGTAT TTGAACGCGC TGAGCGGGAA GGGCGTGCAC
GTGGTGACGG TGAACGATTA CTTGGCGAGA AGAGACGCGG AGTGGATCGG GCAGATTCAT
AAGTTTCTCG GGATGACGTG CGGGTTGATC CAGGCGGGCA TGGCGGAGGA GGAGCGACGA
GTCGGGTACG GAAGTGACGT GACGTACGTC ACAAATTCCG AGCTCGGGTT CGATTACCTG
CGCGACAACT TGGCGCAAAA CACCGGGGAG CTGGTGCAGC GCGATTTCAA CTTTTGTATC
ATCGATGAGG TTGATTCCAT TCTCATCGAC GAGGCGCGAA CGCCGCTCAT CATCTCCGGC
GTGGCGGATA AGCCGAGCGA ACGCTACATT CAAGCCGCAA AGATTGCAGA CGCCTTCGAG
AAAGACTACC ACTACAAAGT CGACGAAAAG CAAAAGAGCG TGTTGTTGAG CGAAGAAGGT
TACGAAGCGG CGGAAGACTT GTTGCAAGTG ACGGATTTGT ACGATCCGCG CACGCAGTGG
GCGTTGTACA TCATCAACGC CATCAAGGCT AAGGAACTCC AAAAACGCGA CGTCAACTAC
ATTGTTCGTG GCCAAGAAAT TATCATCGTC GATGAGTTCT CTGGCCGTAC TATGCAGGGA
CGTCGATGGT CCGATGGTTT ACACCAAGCC GTCGAAGCCA AGGAAGGGGT GACGATTCAA
AACGAAACAG TCACCATCGC CTCGGTGACG TACCAAGCCT TCTTCAAGTC CTACCCCAAG
CTCGGTGGTA TGACCGGTAC CGCCGAAACG GAGATCACCG AGTTCAGTAA CATTTACGAG
CTCGAAGTCG CGGTCGTGCC GACAAACCGA CCGGTCTCGC GGGAGGATTC CACCGACGTC
GTCTTCCGCT CGGAAACCGG CAAGTGGAAC GCCGTGCGCA AGGAAATCTC GCGCATGCAC
AAAAAGGGAC GGCCCGTGCT CGTCGGTACC ACTTCGGTCG AGCGTTCGGA GCAAATCGCA
GAACTTCTCG ACGAAGACGG CATTCCGTAC GAGTTGCTCA ACGCCAAGCC GGAGAACGTC
GAGCGGGAGT CTGAAATTGT CGCTCAGTCG GGCCGCAAAG GGGCGGTGAC CATCGCCACC
AACATGGCTG GTCGCGGTAC GGATATTCTT TTGGGCGGTA ACGCCGAATT CATGGCGCGT
CTTCGCGTTC GTGAGTCGCT CATGCAGCGC GTCGTCATGC CCGAGGACGG CGAAATCGCT
TTCGAAAAGA AAGGGAACCT CGCCAAGTCG GGCGGGAACA AGTGGGCCGT CAAGGAAGGC
TTGTATCCGT GCGAGCTCTC CGCGGAAACC GCGAAGATGC TCGGCGAAGC CGTCGACACT
GCGTGCTCGG TGTGGGGCGA TCGATCTCTC GAGGCTCTCG ATGCTGAGGA ACGCTTGTCC
TTCGCGTGCG AAAAGGGTCC GTCCGAAGAC GAAGCCATTC TCGCGCTACG CAAGGTGTTC
AACGCGATTG AAGCCGAATA CAAGGTGTAC ACGAGCGCTG AAAAGAAGGA AGTCCTCGGG
CTCGGTGGCC TGCACGTGGT CGGCACTGAG AGACACGAGT CGCGTCGCGT TGATAACCAG
CTCCGAGGTC GCTCAGGCCG TCAAGGGGAT CCGGGAAGCA CGCGATATTT CTTGTCACTG
GAGGATAACC TCTTCCGCAT CTTCGGCGGC GATCGCATTC AAGCGTTGAT GAGCGCTTTC
CGAGTTGAGG ACATGCCTAT CGAGTCCGGC ATGCTCACGA ACTCCTTGGA TGAAGCCCAA
AAGAAGGTTG AACGTTACTT TTACGATATT CGTAAGCAGC TGTTCGACTA CGACGCCGTT
TTGAACTCGC AGCGTGAAAA GGTTTACTTC GAACGCCGCC GAGCGCTCAC CGCGAGCAGA
GAGCAACTCC AAGAACAAAT GCTTGAATAC GCCGAGCTTA CCATCGATGA CATCGTGAAC
GCTAATATCG ATACGTCGGA GCCTGTGTCC GAGTGGCCGC TTGAAGGACT CGTCGGCAAG
TTGCGACAAT ACTGCTACTA CTTCGGCGAA ATCGATGAGA GCGACATTCG CCCCATCGCG
GAGAAGGGTG GCGTCAACGC ATTGCGCAAT TTCCTCGTCA AGAAGGGTCA GGATGCATAC
ATGACCAAAT GCGGCGAAGT TGAGGCTACC GAAGCGGGGC TGATGATGGA AGCGGAGCGC
TTCTTCATTT TGTCGCAAAC CGACAATTTG TGGAAGCAAC ACTTGCAGGC TATCAAGTTT
GTGCAACAAG CTGTCGGCTT GCGCGGTTAC GCTCAAAAGG ATCCTCTCAT CGAATACAAG
CTTGAAGGCT TCAACCTCTA CACAGAGATG ATGGCGCAAA TCAGACGCAA CGTCATCTAC
TCTGTGTACA TGTTCCAACC GCAGCGTTTA GAACAAAAGG AAGAGGCAGA ACTCGTCGGT
GCGGGAGGCG ATCAGAAGCC GAACTCGCGC AAAAAGTGA
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| Protein sequence | MLKGDPSEKT KKRYQARVDA VNALGARTKA LSDDELRAKT EEFRERLRRG ESEDDLLVEA
FAVVREAADR VLGLRPFDVQ LIGGMILHEG QIAEMRTGEG KTLVSALPAY LNALSGKGVH
VVTVNDYLAR RDAEWIGQIH KFLGMTCGLI QAGMAEEERR VGYGSDVTYV TNSELGFDYL
RDNLAQNTGE LVQRDFNFCI IDEVDSILID EARTPLIISG VADKPSERYI QAAKIADAFE
KDYHYKVDEK QKSVLLSEEG YEAAEDLLQV TDLYDPRTQW ALYIINAIKA KELQKRDVNY
IVRGQEIIIV DEFSGRTMQG RRWSDGLHQA VEAKEGVTIQ NETVTIASVT YQAFFKSYPK
LGGMTGTAET EITEFSNIYE LEVAVVPTNR PVSREDSTDV VFRSETGKWN AVRKEISRMH
KKGRPVLVGT TSVERSEQIA ELLDEDGIPY ELLNAKPENV ERESEIVAQS GRKGAVTIAT
NMAGRGTDIL LGGNAEFMAR LRVRESLMQR VVMPEDGEIA FEKKGNLAKS GGNKWAVKEG
LYPCELSAET AKMLGEAVDT ACSVWGDRSL EALDAEERLS FACEKGPSED EAILALRKVF
NAIEAEYKVY TSAEKKEVLG LGGLHVVGTE RHESRRVDNQ LRGRSGRQGD PGSTRYFLSL
EDNLFRIFGG DRIQALMSAF RVEDMPIESG MLTNSLDEAQ KKVERYFYDI RKQLFDYDAV
LNSQREKVYF ERRRALTASR EQLQEQMLEY AELTIDDIVN ANIDTSEPVS EWPLEGLVGK
LRQYCYYFGE IDESDIRPIA EKGGVNALRN FLVKKGQDAY MTKCGEVEAT EAGLMMEAER
FFILSQTDNL WKQHLQAIKF VQQAVGLRGY AQKDPLIEYK LEGFNLYTEM MAQIRRNVIY
SVYMFQPQRL EQKEEAELVG AGGDQKPNSR KK
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