| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31397 |
|---|
| Symbol | |
|---|
| ID | 5001550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | - |
|---|
| Start bp | 802622 |
|---|
| End bp | 803963 |
|---|
| Gene Length | 1342 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640416971 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417609 |
|---|
| Protein GI | 145346258 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.635842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCGACGACGG CGACGACGAT GCCGGCGACG ACGCACGCGA CGATGCGCGC GACGTCGGCG
CGCGCGACGC GCGCGAGGAC GACGGCGACG GCGACGACGG CGCGGGCGCG CGCGACGACG
ACGAGGGTTG CGGGACGACG GCCGACGCGG TGCGCGGTGA GCGCGTCGAG CGACGCGGCG
CACGCGGAGG CGTCGGGAGC GATCGATTGG CACGCGATGG GGTTCGGGCT GACGACGACG
GCGTACATGT TCAAGGCGAC GTGCGAGCTC GGGGGGGAGT GGGTCGTCGA GGGCGTGGTG
CCGTACGGCG ACCTGAGCCT GAGCCCGTCG TCGGCGGTGT TGAATTACGG TCAGGGCGTG
TTCGAGGGCA TGAAGGCGTT CCGAACGAGC GAGGGCGAGC TGTTGGTGTT CAGGCCGGAC
GAGAACGCGA AGCGATGCGA GGAGGGGGCG GGACGGATGT CCATGCCGGC GGTGCCGAGG
GATTTGTTTC GAGACGCGGT GTTGAGGACG GTGAGCGCGA ACGCGGAGTA CGTCCCGCCC
GTGGGCATGG GTTCGTTGTA TTTGCGACCG CTGTTGATCG GGACGGGGGC GATTTTGGGC
CTTGGGCCGG CCCCGAGCTA CACGTTCTTG GTGTACTGCT CGCCCGTGGC GTCGTACTTC
AAGGGCGGGC AGCTCACGCC CATCGACTTG ACGGTGGAGG AGACGTACCA TCGAGCCGCG
CCCGGGGGAA GCGGGAGCAC GAAGTGCATC GGAAACTACT CCCCTGTGCT CAAGGTGCAA
TTAGAAGCGA AGAAGCGAGG TTTCTCCGAC GTCATGTACT TGGACGCGAA GGAAAACAAG
TACATCGAGG AGGTGAGCTC GTGCAACTTT TTCTGCGTCA AGGGGAAAAC CATCTCCACG
CCGTCGTTGC AGGGCACGAT TCTTCCCGGG ATCACGCGCA AGTCCATCTG CGAACTCGCC
GCCGCGCGAG GTTTCACCGT GGAAGAGCGC AACGTCTCCA TCGATGAGGT CATGAACGCG
GACGAGTGCT TTTGCACCGG CACCGCCGTC GTCGTCGCCC CGGTCGGGTC GGTGGAGTAC
AAGGGTAAAA CCGTCAAGTT TTGCGACGGT AAGGTCGGCC CAACGTCGCA AGCGATGTAC
GATGAGCTCA CCGGCATCCA ACAAGGTAAG CTTCCCGACG AACGCGGTTG GAACGTCAAG
GTGCCGAAGT TTCCCATCTC TGGCTGAGCG CCGCGTCTCG TGAGCATCGC GTCGACCTCG
CGCCGCCCTG CGGCGTAGCA CCGCGCTCGG TTCGTTCGCC TCGCGCTCCT AGTCAAACTT
CTTCGCTCGG TCTTCGCGCT TG
|
|---|
| Protein sequence | MGFGLTTTAY MFKATCELGG EWVVEGVVPY GDLSLSPSSA VLNYGQGVFE GMKAFRTSEG
ELLVFRPDEN AKRCEEGAGR MSMPAVPRDL FRDAVLRTVS ANAEYVPPVG MGSLYLRPLL
IGTGAILGLG PAPSYTFLVY CSPVASYFKG GQLTPIDLTV EETYHRAAPG GSGSTKCIGN
YSPVLKVQLE AKKRGFSDVM YLDAKENKYI EEVSSCNFFC VKGKTISTPS LQGTILPGIT
RKSICELAAA RGFTVEERNV SIDEVMNADE CFCTGTAVVV APVGSVEYKG KTVKFCDGKV
GPTSQAMYDE LTGIQQGKLP DERGWNVKVP KFPISG
|
|---|
| |