| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31385 |
|---|
| Symbol | |
|---|
| ID | 5001543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 781786 |
|---|
| End bp | 783493 |
|---|
| Gene Length | 1708 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640416964 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417356 |
|---|
| Protein GI | 145345734 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000357166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTC CGACGCGACG ACGCGCGACG GTTGAGTCGA CGACGTCGTT CGAGCACTGT
CGAGCGGGGA CGCCGACGGG ACGAGCGCAG GTGCGCGCGC GCGACGGCGA GGCGAGGCGA
GGCGCGCGCG CGCGGAATTC GCGTCGCGAA AACCGTTCGC GTCGCGCGCG GTGATAAGCG
CGGTTCGACG CGCGCGCGGG ACGCGCGGGA CGCGCGGATG GCGATGGCGA TGGCGATCGA
GGGGATGGAT GATCGTCGAG CGAATCGACG CGCGAGACTG ACGATGTTGA CGGTTCGATA
GGTCGATCGA TTCATCCCGA GCCGTAGCGC GTTGGATTTG GACGTGGCGC ACTACAATTT
GTCCCGAGAG GGCGGGGAAT CGGAGGTGGA TGATGCGGTA AAGGAGATCA AGTCTCCGGC
GAAGGTGCGC GCGTCGACGC GCTCGAAGCG CGCGCGGACG AACGCGTGGA GTGAATGAAT
GAGTTCGTTG AGACTGACGA CGAAATCGAT CGCGCGATGA TATGATGCAC AGGAAGCGTA
TAAGAAAAGT CTTGCGGATA ACTTCCACGT GGATAACGGA AGCGATTCGG CGAAGATTCT
CGCGTTCAAG TCAAAGGCGC CGGCGCCGCC GAGCGGGTTG GAAAACTCGG CGCGCGGTGT
CTACACGAAC AACTCCGCGG GAGTGAAGGC GAAGAAGACG TTCCGTCAGA TTCCCAGCGC
TCCCGAACGC ATCTTAGATG CGCCGGAGTT GATCGATGAC TACTATTTGA ACCTTATCGA
CTGGGGGTCG TCGAACCAAG TCGCGGTGGC GTTGGGGTGC ACCGTGTACA TGTGGAACGC
GGATACTGGG GCTATCAACC AATTGTGCCA GACCAACCCG GATGACGAAG ATGATTACAT
CACCTCCGTC AACTGGGGTG CGGACGGTAA GCACATTGCG GTGGGTACGA ACAGTGCGGA
GGTTCAAATT TGGGACGCGG CGCAGTGCAA GAAGGTGCGT ACGTTGCGAG GTCACGCCGC
GCGGGTGGGT GCGGTCTCGT GGAACGGTTC GCAGCTTGCA ACGGGTAGTC GTGATAACAA
CATCATGATT CACGACGTTC GCATTCGCGA GCATTGCACC TCGACGCTCC AGGTTCACCA
GCAAGAGGTT TGTGGCTTGA AGTGGAGCCC GAGTGGCAAT CAGCTCGCGT CTGGCGGTAA
CGACAACTTG TTGCACATCT TTGATGCGAG CTCCATCGGC AATCAACAAG CGTTGCACAG
ATTAGATGCG CATCAAGCTG CCGTTAAGGC TCTCGCCTGG TGTCCGTTCC AGTCCAACTT
GCTCGCTTCG GGCGGCGGTA CCGCCGACCG TTGCATCAAG TTTTGGAACA CGAACACCGG
CGCCATGCTC AACTCTGTGG ACACGCACTC GCAAGTGTGC TCGTTGCAGT GGAACACGCA
TGAGCGGGAG CTTTTGTCGT CGCACGGTTA CAGCCAAAAC CAGTTGTGTT TGTGGAAGTA
TCCGACGATG ACCAAGATGG CCGAGTTGAC GGGTCACCAA GCGCGAGTGC TTCACATGGC
GCAGTCTCCG GACGGTACCA CGGTGGTATC GGCGGCCGCG GATGAGACTT TGCGATTCTG
GAAGTGCTTC GATAACGCTA GCGAGAAGAC CAAGAAGGTG CGCGATTCCA ATGACTCATC
TGTTTTGCGC AGGTTCAATT TCCGCTAA
|
|---|
| Protein sequence | MLSPTRRRAT VESTTSFEHC RAGTPTGRAQ VDRFIPSRSA LDLDVAHYNL SREGGESEVD
DAVKEIKSPA KEAYKKSLAD NFHVDNGSDS AKILAFKSKA PAPPSGLENS ARGVYTNNSA
GVKAKKTFRQ IPSAPERILD APELIDDYYL NLIDWGSSNQ VAVALGCTVY MWNADTGAIN
QLCQTNPDDE DDYITSVNWG ADGKHIAVGT NSAEVQIWDA AQCKKVRTLR GHAARVGAVS
WNGSQLATGS RDNNIMIHDV RIREHCTSTL QVHQQEVCGL KWSPSGNQLA SGGNDNLLHI
FDASSIGNQQ ALHRLDAHQA AVKALAWCPF QSNLLASGGG TADRCIKFWN TNTGAMLNSV
DTHSQVCSLQ WNTHERELLS SHGYSQNQLC LWKYPTMTKM AELTGHQARV LHMAQSPDGT
TVVSAAADET LRFWKCFDNA SEKTKKVRDS NDSSVLRRFN FR
|
|---|
| |