| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31367 |
|---|
| Symbol | |
|---|
| ID | 5001242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | - |
|---|
| Start bp | 758683 |
|---|
| End bp | 759962 |
|---|
| Gene Length | 1280 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640416663 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417593 |
|---|
| Protein GI | 145346224 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00187629 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCCCTCGCGC GCCGACGATG TCGCGCGCGA TCGCGATCGC GATCGCGCGA CGCGCGACGC
GCGAACGCGC GCCGTGGACG CGCGTCGCGC GGCGCGCGCT GCACGTGCAC GAGTACCAAG
GCGCGGAAAT CATGAAGAAG TTTGGCGTGC GCGTGCCGAT CGGCGCGGCG TGCGGGACGC
TGGACGAGGT CGACGACGCC GCGCGCGCGA TGCGCGGAGA CGAGGTGGTG GTGAAGTCGC
AGATCCTCGC CGGTGGGCGC GGACTCGGGA CGTTCGCGAG CGGGTTCGAG GGAGGGGTGC
ACGCGGTGGC GAAGACGCGC GCGCGAGAGA CGGCGGCGAA GATGCTGGGG GGGACGTTGG
TGACGAAACA GAGCGGACCG GCGGGGAAAC CGGTGAACGT GGTGTACGTG GCGGAGAAAA
TGACGCTGAC GCGGGAGATG TACTTCGCGA TCACGCTCGA TAGGGCGAGC GCGGGACCGT
TGGTGATCGC GAGCGCGGAG GGCGGCACGT CGATCGAGGA CTTGGCGCAG AGTCATCCGG
AGAAGATTAT TAAGATGCGG TTGGACATCG AGCGCGGGAT GACGAAGACG CAGGCGGACG
AGCTGGTGAA ACGACTCGGA ATTTTGAAAC ACGTCGATGA GGCGGCGAAA CAACTCATGG
GGTTGTACGA AACGTTCTCC AAGACCGACT GCACGATGAT CGAGGTGAAT CCGCTCGCGG
AGGATCAAGA CGGACGCGTC GTCGCCGCGG ACGCCAAGTT AAACTTCGAC GACAACGCCG
AATATCGACA GAGCGAGTTG TTCTCCCTTC GCGATACATC GCAGGAAGAT CCGCGCGAGG
TGCAGGCGAG CAAATTCGAC TTGAACTACA TCGGATTGGA CGGCAACATC GGATGCATGG
TGAACGGAGC GGGTTTGGCC ATGGCGACCA TGGACATCAT CCAACTCTAC GGAGGTTCGC
CCGCGAATTT CCTCGACGTC GGCGGGAACG CGAGCGAAGA GCAAGTCGTC GAAGCTTTCA
AGATTTTGAC CGCCGACCCG AAAGTTCAAG CCATCTTGGT GAACATTTTC GGCGGCATCA
TGAAGTGCGA CGTCATCGCC GCCGGCATCG TCGCCGCGGC CAAGCAAGTC GATCTCAAAG
TCCCGCTCAT CGTGCGATTA GAGGGAACGA ACGTCGAGGC TGGGAACAAG ATTCTCAAGT
CGTCCGGGAT GACCATCGTC ACCGCCGAAG ACCTCGACGA CGCCGCGCAA AAAGCGTGCG
CCAGTCTCTC CGCGCGTTGA
|
|---|
| Protein sequence | MSRAIAIAIA RRATRERAPW TRVARRALHV HEYQGAEIMK KFGVRVPIGA ACGTLDEVDD
AARAMRGDEV VVKSQILAGG RGLGTFASGF EGGVHAVAKT RARETAAKML GGTLVTKQSG
PAGKPVNVVY VAEKMTLTRE MYFAITLDRA SAGPLVIASA EGGTSIEDLA QSHPEKIIKM
RLDIERGMTK TQADELVKRL GILKHVDEAA KQLMGLYETF SKTDCTMIEV NPLAEDQDGR
VVAADAKLNF DDNAEYRQSE LFSLRDTSQE DPREVQASKF DLNYIGLDGN IGCMVNGAGL
AMATMDIIQL YGGSPANFLD VGGNASEEQV VEAFKILTAD PKVQAILVNI FGGIMKCDVI
AAGIVAAAKQ VDLKVPLIVR LEGTNVEAGN KILKSSGMTI VTAEDLDDAA QKACASLSAR
|
|---|
| |