| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31219 |
|---|
| Symbol | |
|---|
| ID | 5001255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 511162 |
|---|
| End bp | 512668 |
|---|
| Gene Length | 1507 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640416676 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417266 |
|---|
| Protein GI | 145345542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00425878 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCGCGACGCG CGCGCCGACG ATGGGCAAGA CGCAGAAGCG CGCGCGAAAG AAATCGTCGC
AAGCGCCCGG CGTGCGCGAC GGCAGCGCGA TCGCGAAGCC GACGCACGCG ACGGCGGACG
CGACGACTGA TGTTCAAGTC GCGGTGGCGG CGGCGGCGAT GGCGGTGGAC GACGCGCGCG
ACGACGGCGC GCGATCGAGA GACGTGAGCG AAGGGACTAT TTTACGTGCC CTGCTCGCGC
AGTCGTGCGT GGACGCGTGC AAGGCGCTGG ATGCGGCTCT GGCGCGCGGC GTCGCGGTGC
GGGCGGATAC GTGCGCGAGA GTGCTGGCGT TGTGTCAGGC GCGAGAGAAG GCGAAACCGG
CGCTGCGATT GCTGCAAAGA ATGGAAGCGA ACGGTATGGC GCCGTCGCGA GAGGCGATGC
GGTGCGCGTT CTTCGCGTGC GCGAAGCGGG GAATGTTGCG CGAGGCGCTG GTGTTGATGT
CGCGGCTCGA CGGCGAAGGA AAGCGTTTCT TAGGGAAGGA TGTCCTCGTG CGAGCGTGCG
CGATGTGCCC AGGGGGCGTC GATGGGGATT TAGGTTTAGC ATTATTGGAA AGCGCGCTGC
GCGGTATCAT GTGCGGGTCT TGGGAGCCGG GATCTACCGC GACGATTCGC GCGCAAATGC
CGTTCGCGGT GCCGCGCACG AAGGACGACG ACGACATTCC CGCGCCATTG GTGCGTCGCG
ATATTGAATA CGCGCCGGGT AGCTTTAAAA TGGTTTGCGA TAACGATGGA CGACGTCGGC
CGGTGGATAG GTTGCCGCTT GAGCTGTACG CGCCCGCGCA CCCGGGCGTA ATCCCATTTG
CGCCTTCAGG ATTGACAGAG GCGGCGCGTT ACGACGTGCC GCACGTTCCG GGGGCGTTCG
TCGTGACGAA TCTTCTCACG AAAAGCGAAT GCTCAGCAAT CATAGCCGCC GGTCACGCGA
TTGGGCTTCG TACCGATCCC GGCGACGTCG ACGGTGTCAC GGGCGCGTCT CGTTTGCAAT
ACTGCGAGTT CATGGTTTGG CCGCAAAATA TTCAAGGTCT GTGGCGACGA ATCGCAGACT
TAATGCCTCC CGGTGCTGTG GGTATTAACG CGCGCTGGAG GTTCTTCCGT TACGGTCCTG
GTACGATTTA CCGCCGTCAC GTGGATGGGT CCTGGCCCGA GGGCGCACTC AACGAGGAAT
GCGAATATGT CACCGACGTC TCCGATGGCA AAGTCCGCTC GAGGTTGACT TTTCTGATTT
ATCTCACCGA AGGCTTCAAC GGTGGATCGA CGACGTTTTA CACCGCTACG CCGAGCGAGC
CTGGAGTCTT GAGCGCGCGA GGTGTCGTGC CACAACTTGG CGCCGCGCTC TGCTTCCCGC
ACGGCGAAGC CGAGGAGTCG CCCGTGCACG AAGGCAGCGC CGTGACCGCG AGCTTGAACG
GAGGCGAAAC GTTCAAGTAC GTCATTCGCA CAGATGTGCT GTTCAATGTG TCGGATATCT
AGACTAG
|
|---|
| Protein sequence | MGKTQKRARK KSSQAPGVRD GSAIAKPTHA TADATTDVQV AVAAAAMAVD DARDDGARSR
DVSEGTILRA LLAQSCVDAC KALDAALARG VAVRADTCAR VLALCQAREK AKPALRLLQR
MEANGMAPSR EAMRCAFFAC AKRGMLREAL VLMSRLDGEG KRFLGKDVLV RACAMCPGGV
DGDLGLALLE SALRGIMCGS WEPGSTATIR AQMPFAVPRT KDDDDIPAPL VRRDIEYAPG
SFKMVCDNDG RRRPVDRLPL ELYAPAHPGV IPFAPSGLTE AARYDVPHVP GAFVVTNLLT
KSECSAIIAA GHAIGLRTDP GDVDGVTGAS RLQYCEFMVW PQNIQGLWRR IADLMPPGAV
GINARWRFFR YGPGTIYRRH VDGSWPEGAL NEECEYVTDV SDGKVRSRLT FLIYLTEGFN
GGSTTFYTAT PSEPGVLSAR GVVPQLGAAL CFPHGEAEES PVHEGSAVTA SLNGGETFKY
VIRTDVLFNV SDI
|
|---|
| |