Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_31158 |
Symbol | |
ID | 5001397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 411158 |
End bp | 413562 |
Gene Length | 2405 bp |
Protein Length | 781 aa |
Translation table | |
GC content | 56% |
IMG OID | 640416818 |
Product | predicted protein |
Protein accession | XP_001417235 |
Protein GI | 145345476 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5021] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000507428 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTGG ACGACGAATC AATCGTCGAG GACGACGCGT CGTCTTCGGA TTCTTCCGAA TTGGATTTTG TCGTCGACGA CGACGAGGAC GAGACTGCGA CTGAAGTTGA CTTCACGCCT CGAAGAACCC GGCTGAGTCT GGGATCGAGC GTTGACGAGG CTCTGAGCAT CGACGACGTC GCAGCGTTGA AACGCGCTCT CTCACGTCTA GAGGAGACAC CTCGACCGGG TCGCGTGCTC ATCTCCGCGG CCGCGCACAA CGCCATAAAC GTAGCGAGCG AGTTCTTGGC GAATGGTATT CGAGTAAATG GTCAGTTGAA CGAGAGGGGA TCCAAGAAAC CGCACATCAC GGACATCGCC GACGCGCTTC ACATCGCGTG CGAACGAGGC AACGTGGATT TCGTTCACGC CGTGAGGGAC CAAATCGGAT TGGCGCAGTT CTGTCGAGGT GGTGACACCG GCGGTTGGCC GACCTCAGCG ACGGGCGGCA CACTCGTCCA TTCGGCGGCG GATAACGAAA AAGCGAGCGC GGAGTGCGTT GCAGCGGCGA TTATGGCGGA GTCACCACCG AAAGGGCGCG TCATGCCCGT GGCTGCGGTG TTCGACGAAG ACGCTCGCGG CGCACGCACG CCGTTGATGA TCGCTGCGGG TGCAGGTCCC GAGTGGGGGT CTTGCGTTGA AGCGCTCTTG AGGGATGCCA GAACATACGG CCAACGCGCA GTGCGAATCG CGATACGATG TCAAGAGCCA CAAGAAGGAT GTTCTGCGGT GCACATCGCC GCCGTCGCCG GAAATGTGGT TTGTTTGGAG AAATTTCTAA AGGAAGATCC ATCGTGCTTA AAGGTGAAAG ACTACAACGA TTCGACGCCA TTGCATTGGG CATCTATGGA AGGACGGCAC GAGACGATCC GAGTGTTGCT CGAGAAGGGC GCCAACAGAC TAGCGATTGA CAAAATGGGT TGGATTCCGT TGCTCTACGC CAATTTTCAC GAAAAGAGTG AGGCAGTTTT ATACTTGCTC GAGAAACAAG TCTCGGAGCA ATTGCAGACC ATGTTCACTG CGGTGGCATC GGAGGACGAT GGGAAGTCCA AGTTGCAGGT ACAAAAGGTT TTGAATTTGC TCGCAGCCAA ACCAGCGTAC TACGATGCGA TAAACAACTG CATCAGGAGA GACATGTCGC TCTTGGGCCC TGTCATGAAC ATGCTGCGCG AATGTGGAGC GATTACTATT ATCAATTTGG CCAACCGCGT GTCGTTCTTG CGCAATACGT GGCTCAATGA ATATGGATTG CAAAATTTAG CTCTCTCGAA AAGTTTCACC TTGTCTGCGC AAGACGCTTG GCACGACTTT TTCGTAAATG TCTGGTCCGT CTCGCCAAAG ATTTTGAAGA TTCGACATCT CAGTTGGGGC TTGCGGCAGC CATCGGGGGA TGTTTCAGTA GGTCCGGGAC CAACGCGTGA AGCGTTCAGC TTGATGGCGA ACGAGTTGTG CGATGGAAAC AGAGCCGACC GCCAGCTATT TACACAGGAT GACGCGCGCA CGTACAAACG TAAGGAAGGT ATCGACCGCC CGAGCGTGCT GAAAGAGCTC CAGTGTTTCG GCGAACTTCT GGCGCACGTG GTGCTCTTCG GCAGCGCCGT TTTACCGATT CCGTTCTCCA AAGTCTTCCT GAGGCGCGTC ATCGCCAACG AAAAATGTGA CGCGTTCACT CTAGACGATC TCGCCGACGT TGAGCCCGCA GTGGTGAAGT CGATCAAGGT TGTGCTTGAA ACCGACGACG TCGAATCGCT CTGTCTCACG TTTATCGATC CGACGACGAA CGAAGAGACA GACGTCACGA AGGCAAACTT GCAAGCATTC AAGCGACAAA AAATTCGCGA AATGGTGTCG AGCATCGTAG ACGACGCATC CGTGCACGCG ATCCGCACAG GTTTGCTCCA AATCATGCGA AAATCACAGA TCGAGGTGCT GGCGCCCGAA GAGTTTGGCC TCGTCGCCGC CGGCTCGCAA TCGATCGACC CCAAGGAATG GCGCCGACAC GCCTCCTTCT CACCAAGTCC AGAGATGGAA TGGTTTTGGG ACGTGGTCGA ACGCATGAAC AACGACGACA AATCTCGTCT CCTCCAATTC TCCACCGGGA GTAGTTTACT TCCGGTCGGT TCTTTCGCCG CGCTGTGTCC TCCGTGGAGC ATCGAAGTCG GTCTTCACCG CGACGCCAGT AAGCTCCCCA CCGCCTGGAC GTGCTTCAAC ACGCTTCAAA TGCCGCGCTA CCCATCGAAA GAATTGCTCG AAGAGCGCTT GTTTTGCGCG CTGCGCCACG GAAGCGCTGG ATTCGCCTTT GCGTGACGTT CGCCGAACGC GCCTCGCCTC GTAAACGCGC GTGTAACACG CTTTGATTCG CCTCG
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Protein sequence | MDVDDESIVE DDASSSDSSE LDFVVDDDED ETATEVDFTP RRTRLSLGSS VDEALSIDDV AALKRALSRL EETPRPGRVL ISAAAHNAIN VASEFLANGI RVNGQLNERG SKKPHITDIA DALHIACERG NVDFVHAVRD QIGLAQFCRG GDTGGWPTSA TGGTLVHSAA DNEKASAECV AAAIMAESPP KGRVMPVAAV FDEDARGART PLMIAAGAGP EWGSCVEALL RDARTYGQRA VRIAIRCQEP QEGCSAVHIA AVAGNVVCLE KFLKEDPSCL KVKDYNDSTP LHWASMEGRH ETIRVLLEKG ANRLAIDKMG WIPLLYANFH EKSEAVLYLL EKQVSEQLQT MFTAVASEDD GKSKLQVQKV LNLLAAKPAY YDAINNCIRR DMSLLGPVMN MLRECGAITI INLANRVSFL RNTWLNEYGL QNLALSKSFT LSAQDAWHDF FVNVWSVSPK ILKIRHLSWG LRQPSGDVSV GPGPTREAFS LMANELCDGN RADRQLFTQD DARTYKRKEG IDRPSVLKEL QCFGELLAHV VLFGSAVLPI PFSKVFLRRV IANEKCDAFT LDDLADVEPA VVKSIKVVLE TDDVESLCLT FIDPTTNEET DVTKANLQAF KRQKIREMVS SIVDDASVHA IRTGLLQIMR KSQIEVLAPE EFGLVAAGSQ SIDPKEWRRH ASFSPSPEME WFWDVVERMN NDDKSRLLQF STGSSLLPVG SFAALCPPWS IEVGLHRDAS KLPTAWTCFN TLQMPRYPSK ELLEERLFCA LRHGSAGFAF A
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