Gene OSTLU_31047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_31047 
SymbolTPR3 
ID5001312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp213273 
End bp214301 
Gene Length1029 bp 
Protein Length342 aa 
Translation table 
GC content60% 
IMG OID640416733 
ProductTPR-repeat containing protein 
Protein accessionXP_001417180 
Protein GI145345357 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0237182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTGC TGTGCGCGTC GTGCGTCGCG TCGCGCGCGA ACGGCGCGCT CGGTGCGACG 
TGGTTGCGCG CGTACGTGGA CGATTCTGGG CGAACATCGG GCCCGCGCGT GCGCCGCATC
GAAACGGCCG CGATCGGCGG CGAAGGGTGG TCCGACGCGT GGGATCTCGA GTCAGGGAGC
GCGGAGCACG TGCGACACGC GTACACTGGG GCGGAGATGA ATCGGATGTT CGCGAGGGTG
CCCGCGGCGG CGCCGGTGGT GTACACGACG CCGCAGCGGT CGTGGATCGA CGTGGGCGTA
TCGAACGAGT TCGATCGTAA AGTGCTCGTC GAAGCGAGCG ATGATGACGG TGAGAGTGAT
GGGGTGGATG AGAAGGAGAG GCACGACGGA GATGAGGCGT TGCGTGAGAA GAAGAACAAG
TATTTTATGT CCAGCGTAAG CGCGTCTTCG CTGCAGCACA TGTTGAACAA GTACGGAGGG
ACGGTAGATA GCGCGTTTGA GACGATCAAT CGACGGTTGG AGATTGATCC GAATAATCCA
GTGCTGTGGG CGGACCTGGG GAACACGCAC AGGATCATGG CGGAGAATAA AGAGGCGGCG
GAGTGCTTTG CCAAGGCGTT GCGAATCATG AAACATCCCG AGCTGTATCA GTTGCTTGGC
ACATGCTTAG TAGTGACCGA GCGCACCGAA GAAGCGATCG GGATTTTCAA GCAAGGTATG
GAGACGTTTC CGGGCGATCC AGCGTCGACG TTTAGTTTGG CTTTGGTGTA TCTGCAGCTC
GAGCAGTGGC ACGACGCCAT CGTCGTGCTC GAGGCGTTGA CTCGCGTCAA TCCAACCTTC
GCCGGCGGAT TGGCGAACGA ACATTTACTC ATCGCCAGAA GGCAACTGCA GCGCGAATCG
TCCGGGCGTA TAGATGCGGG AGTGTTCGTC ATATTCGTGG TCACCCTTGT CGCCCTCGCG
TGGTTGCAGA TGTCGCGTCA TTTCCAACGA GTGAAAAAGG CGCACTCGCG CAAGCAAAAG
CGGCGATGA
 
Protein sequence
MVVLCASCVA SRANGALGAT WLRAYVDDSG RTSGPRVRRI ETAAIGGEGW SDAWDLESGS 
AEHVRHAYTG AEMNRMFARV PAAAPVVYTT PQRSWIDVGV SNEFDRKVLV EASDDDGESD
GVDEKERHDG DEALREKKNK YFMSSVSASS LQHMLNKYGG TVDSAFETIN RRLEIDPNNP
VLWADLGNTH RIMAENKEAA ECFAKALRIM KHPELYQLLG TCLVVTERTE EAIGIFKQGM
ETFPGDPAST FSLALVYLQL EQWHDAIVVL EALTRVNPTF AGGLANEHLL IARRQLQRES
SGRIDAGVFV IFVVTLVALA WLQMSRHFQR VKKAHSRKQK RR