| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31015 |
|---|
| Symbol | |
|---|
| ID | 5001418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 160993 |
|---|
| End bp | 165044 |
|---|
| Gene Length | 4052 bp |
|---|
| Protein Length | 1196 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640416839 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417160 |
|---|
| Protein GI | 145345316 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[Y] Nuclear structure |
|---|
| COG ID | [COG5101] Importin beta-related nuclear transport receptor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.131958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGT GTCGATCGCT GTGCGCGCGG GGACGCGGGC TCGAGGCGCG ACACTTCGGC
TTCGGCGTGC TGCGGGACGT GGCGCGGACG CGCTGGCGAG GGCTGACGGC GGAGGAGCGG
ATGGAGATGG CGAGCTTGGC GCACGGGATG CTGCTGGAGG TGAGCGCGGG AGACGCGGCG
GAGGCGTACG CGGTGAAATC AAAGGCGGCG ACGCTCGTGG CGGAGACGGT GCGGCAGGAG
GGCGCGAGTC TGTGGACGAG GTTGGTGCCG GATTTGGTGA GCATGACGAC GGGGGACGAG
GCGCAGAGGG CGGAGATGGG GGTGAACGTC ATACGGTACG TCGCGGAGGA CGTGGCGGTG
TATAACGAGG ACATGATAGG TGGGAAGATG CGAGAGTTGT TGGGCGGGTT GTCGAGCACG
GTGGGGACGA TTTTGCCGGC GATTTACGCG CTGATGGAGA AGCATTACAC CAAGGCGACC
GCGGCGACGG ATCGCGAGGT GGCGAAAAGG CACGCCGCGG CGGTGAATGC GGCGCTCGGG
GCGGCTGCGG TGTACAGCGA GTGGGCTCCG TTGGCGCCAA TCATGCGGAG CGGTTTGATC
GAGGCGTGTG GGATGCTCTT GGTGCGTCTA GTTTTCTTCG CGCGCGCGTC TTTTTTTTCT
TCGTCCAACA CACGAACACG CACGACGCCG ATGATGATAA TCCAATAAGG ATCAACCATC
CGAACATCCC TATGTGGAAT TTTTGCTAGT ACTGTCCGAG GCGCGCGTGA ACGACAAAGC
GCCGGTGTGT TTGTTTTTTT TTGACTCTCG ACTGACTCGC GCCGGACGTC ACGAACCGCA
GGCGAGCGAT GAATTTCGTT GCGCGGCGTG CGATGCTTTG AGACACGTCG TCGCTCGCCG
TGCCAACGTC GCGCAAGGCG TGGACGAGCA AGATGATCAG GATATCATCA AGGGTTTGAC
GCTCGCGGCG AACGCGATGT CCACGGCGGC GGAACGCGTG ATTTCGCACC CGAACCAAGC
CGATCTCGTG AGCGATCCAG AAGAAGTCAT GTTCATCAAG AGACTGGGTG AGACGATGGC
ATCGATGGCG GGGTACCATC TCAGCACGAT CACGGACGAG AGCACGCGTA ACGTGTTCCT
CGAGCGATTG ATGGGGCTGT CGCGATTTCC TAGTTTGGAG GTTTTGGACG TCGTTATCGG
CGCGTGGCCG GTGATGCTCC GCGCCATGGG TGCCGAGCTT CCCAAGACGT TCGTGCGAGG
ACCACCGTCG CAAGGAGTTA ATAATCCATA CAACGCGCAA AAGCTCGAGC CGAACGGGAT
TCTTCCCATG GGCGCTCCCG AGGTTTTGCT CGAAATCTCG CGCGTGTGGC TCAACGCCGG
CGCGGGCATC GCCTCTGGGT TTGACACCAA TGGTATTCCG GGTAATAAAG CGGAAGATTG
GGCCGATGAA TTCGAAAGCG TGGTAGAGCT TCGCGAGACG TGGGTGCAGC TTCGGGCGAA
ATGGATGGAC ATCACCAAGT TGTGCACGGC GTTGTGTCCG AGCAGCGCGG CGAATCAAGC
GTCGCAAAAC ACGCTGATGG TGATTTCGTG GACGCAACCA GGCGGACCTT TGGCGAATAG
CTCGGATGAA ACGAAATGCG CGGCTCTGGA GGGTGCGACG TCGTTTTTAG AAGCCATCAT
GGTCGCTCTT CCGACCGAGG GTCCGTCGTT TATGGGCTTC GCTAGCACGT TGGAGGCGCT
CCTCGGCCAG CTCGTGGCGA TTGACTTCAA GGCGCCGCTG AGCAACGCGC AGGTGTCCAA
ATTGCTCGAA ACGTTCGGCA AGTTTGCCCG GGCGCGTCCA GAAGTGGCTC TGACGATAAT
GAGTCGACTT TTTACGATTT TGAATGAATT GCCCGCCGAC GTACAATCTG GAGCGCCGCC
GGTGCGGCAG CGCGACATCG TCGCGAGCGG GCGCACGGGC CAGGCGGCGA GACAAAAAGT
GTGCGCGGCG ATTCTCATAG TTTGTTCAGC GGCCCCAACG GTACGTCAAT CGATGCGCTC
GACTGATTTT CGACACCAAA GCGCCTCTTA GAAAACTTGA CGAGCCTTTT CACTCGTTTC
GATTTATGCT GGGGCGCGAA ATAAATTCGC GAACGCGGCT CGAGCGCAGC CTCTTCGGCG
GCTTCTCTTC GATTCGTGGT CGCCACATAT TTTTGACGCG CGCGATTCGA GATTACATCG
ACTGACGGAC AACGCGAACG TGTTTCACAT CACGGCAACA GGCTTTGAAC CCACATCTGG
AGGCTTTTGC CTCTCAAATC GAAACCATGA AATCTTCCGG ACGACTGAGC GGCGCCGAGC
GAGGTTCGCT CGCCGAGGCG CTCCTCGCGG TTGCTGGGCC GTCCGGCGCG CAGCGCGTGC
GCGAAGTTCT CGAGTGGCTG CTGTCATCCG TCCGAAATAG ATGGGTTCCT GGGGGTGCGC
TCTCGCCAGA GGTTGAGCAT CTGTTGGCCA TTTCTACGAT GGCGGCGGGC GAAGCCGCCG
GCGGAACGCA AGGCTTGTCG TCGGCGCACT GGGAGCTGTT TCACGACGTA CAACTCACCG
AGCGTTGTCT TCGACGGAGT TTGGGTGATG CGGAAACAGC TAAAGTACCG ACAGGTTTGA
TGAAGCCCGT GGACCCACCG CCACCGATAT CGGAATGTCC GGCAGTGGAT CATATGGAAT
GGGCCGTCTC GCTCGTCTCG TGCTTGGCGC GAAGAATTCA CTCGTACTGG ACTCCGCAAG
GGAGCGCGGC GATGCACAGT TGCCAATTAG GCGCGGCGCT TGGAATGAGC CCCGAAGAGA
AGGCGGCGTA TTTGATTCAC GGTCCGGCGC GAACGCAAGT TCTCAACGAG GAAGAACCCG
GGACGAGCAC GACGGCGAGC GCGTCTCGCG ATTGGATGCG ATGCCTGCGC GATTGCTCGT
ACTCGGTCTT CGCGTTGTTC AGCATTCACG CTCCCGCGGC ATTTTACCCG AACCAAGCCT
TAGCGAGCGC GTGTGGTGGG TCTATGTTAG CTGATCTGCC GTACATGGAG CTCAGGCACG
TTCGTCAAGT CGTGCACGCG GCGGTGCGAC CGATCATGGG GCGGTGTCCG GCGGCGCATC
GCGCGATGTG GCAGACGGCG CTCGTGAACC CGCTGTGCGC GGCGCTGCAC GACCGCCTCG
CCAAGGAATG GGCGAACACG CGCGTGGTGA ACGCGACCAA GGCGCAAGAA AGAGGAGATG
AAGACGACGA GACGGATGGC GTCGAGGTGA ATGATTTGAT TTCTGAACGA ATTCTTCGCG
ACATCACGCG GGACCACTGC GCGATGCTCG CCATCGTCGC GGCTCCCGAA GGCACGTTCG
GGCGCAAGAC CAAAGGGAGT GGGTTGACTG GTGTCATGGG TGATATGTCA AACACGCTAT
TAGGGACATC GTACGCCGGA GGGAAACACA TATTGGATTG GATCGCGCAC GGTGACGCTA
ACGCGATTCG CGCCGGCATC GCCACGGGGG CCGCCGCGCT CACGTGGGAA GACGCGGAAT
CCACCGGCCA CGCCGTGAAC TTTGTGCGCG GGCTGTGTGC CGCCGCCGGG AGCGCGAACG
CACCGCAAGC GTTGCGAGAC AACGTCGGTT CAGATGTCTT CCAAGCCACC CTCGTGGCGC
TGACGCAAAG CTCCAACGCC GCGCACCAAG CCGACATTCT CGGCTTGATT CGCGACATCA
TCATTTGGCT CACCCCGAAG ACGCAATCCG TGGTACAAAT CTTGATGAGT CTTCCCGGAA
TGACGCAGCA AGCCCTCGAT TCATGCGTGC GAGAGCTCGG TGCCATGCGA AGCGAGAAGA
AAGCCGCTAA TTTCGTCAAG GACTTCTTAA TCAACGCCAG CGGAGGAGGA GAAGAGCTTC
GCGCCCTCGT CGAGGCGCGT TCGCAAACCA ACAAGAGCGG CGTCGCGATT CAAATACCGA
AGACCGCCCC GCGAAATCCA GTGAAGCAAT CGACGAGTCC GGACAATCAC GGTTTCTCCG
CCGAGGCGGC GTCCAACGCG ATCGGACTGT GA
|
|---|
| Protein sequence | MEACRSLCAR GRGLEARHFG FGVLRDVART RWRGLTAEER MEMASLAHGM LLEVSAGDAA
EAYAVKSKAA TLVAETVRQE GASLWTRLVP DLVSMTTGDE AQRAEMGVNV IRYVAEDVAV
YNEDMIGGKM RELLGGLSST VGTILPAIYA LMEKHYTKAT AATDREVAKR HAAAVNAALG
AAAVYSEWAP LAPIMRSGLI EACGMLLASD EFRCAACDAL RHVVARRANV AQGVDEQDDQ
DIIKGLTLAA NAMSTAAERV ISHPNQADLV SDPEEVMFIK RLGETMASMA GYHLSTITDE
STRNVFLERL MGLSRFPSLE VLDVVIGAWP VMLRAMGAEL PKTFVRGPPS QGVNNPYNAQ
KLEPNGILPM GAPEVLLEIS RVWLNAGAGI ASGFDTNGIP GNKAEDWADE FESVVELRET
WVQLRAKWMD ITKLCTALCP SSAANQASQN TLMVISWTQP GGPLANSSDE TKCAALEGAT
SFLEAIMVAL PTEGPSFMGF ASTLEALLGQ LVAIDFKAPL SNAQVSKLLE TFGKFARARP
EVALTIMSRL FTILNELPAD VQSGAPPVRQ RDIVASGRTG QAARQKVCAA ILIVCSAAPT
ALNPHLEAFA SQIETMKSSG RLSGAERGSL AEALLAVAGP SGAQRVREVL EWLLSSVRNR
WVPGGALSPE VEHLLAISTM AAGEAAGGTQ GLSSAHWELF HDVQLTERCL RRSLGDAETA
KVPTGLMKPV DPPPPISECP AVDHMEWAVS LVSCLARRIH SYWTPQGSAA MHSCQLGAAL
GMSPEEKAAY LIHGPARTQV LNEEEPGTST TASASRDWMR CLRDCSYSVF ALFSIHAPAA
FYPNQALASA CGGSMLADLP YMELRHVRQV VHAAVRPIMG RCPAAHRAMW QTALVNPLCA
ALHDRLAKEW ANTRVVNATK AQERGDEDDE TDGVEVNDLI SERILRDITR DHCAMLAIVA
APEGTFGRKT KGSGLTGVMG DMSNTLLGTS YAGGKHILDW IAHGDANAIR AGIATGAAAL
TWEDAESTGH AVNFVRGLCA AAGSANAPQA LRDNVGSDVF QATLVALTQS SNAAHQADIL
GLIRDIIIWL TPKTQSVVQI LMSLPGMTQQ ALDSCVRELG AMRSEKKAAN FVKDFLINAS
GGGEELRALV EARSQTNKSG VAIQIPKTAP RNPVKQSTSP DNHGFSAEAA SNAIGL
|
|---|
| |