| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31001 |
|---|
| Symbol | |
|---|
| ID | 5001156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 130685 |
|---|
| End bp | 132856 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640416577 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417154 |
|---|
| Protein GI | 145345302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5644] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.565722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGCG ATGACGAGGC GGAGGAGGCG GTGCGGGCGA AGGCGAAGTC GACGTCGAGG
ACGAGGGCGA AACCGACGCG CGAGGTCGTC GAAGAGGAGG ACGTCGAGGC GTTGGTTTCG
AGCGAAGACG ACGACGACGA AAAACGCGAG CGCGTGCTGG ATGAACTCGT CGGGGCGCGT
AAACGAGTGA CGCTGGATCC TCGGTATCGA CCGGTGATCA CGGAGGTCGG GAGGGAGAAT
CCGATGGCGG TGCCGCTTCG TCTTCGCGAG GGCGAGGAGA AGCTGACGCT GAAGGACGTC
ATGGCGTCGC TCGGCGAAGA CGCGCTCGAT CGCGATACGG TGAAGCGGTT GAATAAGATT
TCGAAGACTA AGGCGGTGGA TGCGCCTTTG GCGCGACCGA TTAAAGAGCG TATCGATCGC
AAGGCGGCGT ACGCGGAGAC GAGCAAGGAC ATCGGCAAGT ATCAAGCCGT CGTCAAGGAA
AATCGCGAAA AGCGAACGCT CAAGTTTGAG CCAGCGCGCA AGGAGATGCA ACGCAAGGAC
ACGCTCGGTG CGCTCGCCGC AGATTTTACG CCGCGATCGG AGGTTGAGTT GGAAATCGCT
CGCGTTTTGA AAGAGTCTGG GCACGCGAGC GCCAAAGACG TCGTGCGCGG CGAGTTGCTC
GAGATGAACC ACTTGGACGT CGAGGACATA CAGGCGCGCC AAGCCAAGCT CGCGAAGATG
CGTGCGGTTT TGTTTTATCA CGAGCAAAAG GCGAAAAGAC TGAAAAACAT CAAGTCTAAG
GCGTTCCATA GGCACAATCG CAAGGGAGAA CTCAAGGTGA TCGGAGACGA GGATGACAGC
GATTACGAAG GCGAGGGCGA CACCCCGGAG GAACGCAGAG AGTACCTTCG CGCGCAAGAG
CGCATGCTGT TACGTCACAA AAACACGTCG AGGTGGGCGA AACGGGCGAT TAAAAAGGGT
ATCGCCCATC TCGCCGGGAC GCGAGAAAAG TTGCAGGAGC AGCTGCGCAT CGGCCAACAA
TTGAAGGAAA AGATTGAAGG CACTCGAACG ACGACGACGG AACTCGACGA AGAGAGCACG
GACGCCGAAG ACTCTGAAGA CGAAGATCCC AACGACCCCG AAACCGAACG CAAGCGACGG
CTCAGGGCGA AAGCCGCAGC GTTAAAGGCT TTGGAGGACG GCGGCGACGA CGATGTCGAG
GGAGCGAACG ACAGCTTGTT CAAACTGCCC TTCATGGCGC GTGCGATGGA GAAACGCAAG
TCGCAGACGA AAGCAGAGGC GCAAGAACTG CTTGATGAGC TCGATAGAAT GGAACAGAAC
GGAGAGGAGC TCAGCGATAG CGACGATGAT CATGAAGAGT GGGACGCGAT GACAACGAAT
GCGAAGCGCG CCGCCGACGC CCGAACAGCG TCTGCTTCAA AGAAGGCTCG CACGGGCGAC
AACGACGTCG ACGCGCCCGC GAAAAATTCC AGCGGGAAAC AGTCGACGCA GCCGAAAAAG
TCAACTGCAA AACCTATCAC GGAGATATCA GATGCGGCGA GGAAGATGCG TGCGAAAGCT
GCCGCACGAG TGGCGCCGGT GAAAGTCAAG TCTGGCGAAT CCGACGAAGA CGCCGACGAC
GGACCGACGG TGATGCTCGA AGAGGAACGC GACGCGGGGA CGACGAACGA AGACTTGATG
CGGCGAGCGT TCGCGAACGA CGACATCGAA GCAGAATTCG AAAAGGAAAA GCTCGCCGAT
GTCAGCGCAG AACTTCCTGA AACGGACATG CCGAAGAATC TTCCAGGATG GGGCGCGTGG
GCGAGCGACA AGCGCGTTCC GAAATGGATG AAGGACGCGG AGAAAAAGGC GAAAACTGAG
CGCGCGAAGG CTTTGAAGAG TCGTCGCGAC GCCAAACTCA AGCACGTCGT AATCAGCGAA
AAGTACGATA AAAAGGCTGC GCAATTCAAC GTGGAATCGC TTCCGCACGG GTACGCGAGC
AAGGCGGCGT ACGAGGGCAC GATGCGTCAA CCTTTGGGAT TGGACGTCAA CACGCACGGC
ATGTTCCAAA AGTTGAACGC GCCGAAAGTA TTGAAGCCAA CGGGCTCTAT AATCAAACCC
ATGAAGTTGC CGAAACACAA GGCGAAGGAA GCGTCGACGT CCAAGTCTTC GCGCAAAAAG
AAGGCGCGCT GA
|
|---|
| Protein sequence | MDSDDEAEEA VRAKAKSTSR TRAKPTREVV EEEDVEALVS SEDDDDEKRE RVLDELVGAR
KRVTLDPRYR PVITEVGREN PMAVPLRLRE GEEKLTLKDV MASLGEDALD RDTVKRLNKI
SKTKAVDAPL ARPIKERIDR KAAYAETSKD IGKYQAVVKE NREKRTLKFE PARKEMQRKD
TLGALAADFT PRSEVELEIA RVLKESGHAS AKDVVRGELL EMNHLDVEDI QARQAKLAKM
RAVLFYHEQK AKRLKNIKSK AFHRHNRKGE LKVIGDEDDS DYEGEGDTPE ERREYLRAQE
RMLLRHKNTS RWAKRAIKKG IAHLAGTREK LQEQLRIGQQ LKEKIEGTRT TTTELDEEST
DAEDSEDEDP NDPETERKRR LRAKAAALKA LEDGGDDDVE GANDSLFKLP FMARAMEKRK
SQTKAEAQEL LDELDRMEQN GEELSDSDDD HEEWDAMTTN AKRAADARTA SASKKARTGD
NDVDAPAKNS SGKQSTQPKK STAKPITEIS DAARKMRAKA AARVAPVKVK SGESDEDADD
GPTVMLEEER DAGTTNEDLM RRAFANDDIE AEFEKEKLAD VSAELPETDM PKNLPGWGAW
ASDKRVPKWM KDAEKKAKTE RAKALKSRRD AKLKHVVISE KYDKKAAQFN VESLPHGYAS
KAAYEGTMRQ PLGLDVNTHG MFQKLNAPKV LKPTGSIIKP MKLPKHKAKE ASTSKSSRKK
KAR
|
|---|
| |