Gene OSTLU_24477 details

Gene Information

• Locus tag: OSTLU_24477
• Symbol: TPR4a
• ID: 5001650
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Ostreococcus lucimarinus CCE9901
• Kingdom: Eukaryota
• Replicon accession: NC_009358
• Strand: -
• Start bp: 885979
• End bp: 887942
• Gene Length: 1964 bp
• Protein Length: 612 aa
• GC content: 66%
• IMG OID: 640417071
• Product: TRP-containing protein
• Protein accession: XP_001417631
• Protein GI: 145346302

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.000106986
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGCA GCGCGGGCGG ATCCACGGGC GCGGCGTCGC TGGCGACGCT CGACGCGACG 
ACGTCCGAGG GTGACACCCA TCTGAGTCCG ATGCTGATGC GAACGGACGG CGCCGAACGC 
CTCGACGACG ACGCGCTGCG GGCGTCGCCC GAGCGCGCCG CGGCGACGCG CGCGGCGCAA 
TCGTCGGGAT CGGCGTTCGG GATGGGCGGC GCGGGCGGCG CGGGCGAAGC GCGGCGACGG 
GGACGCGGGA CGCGACGAGG GGACGAAGAC GCGGACGACG ACGCGGACGT CGAACGGTCC 
GCGAGAGACT TGGACGACGA CGGCGGATAC GAGACACGAA TGCCCGCGGT GGACGCGGCG 
GCGGTGACGC GGTCGATCGA AAATCCGGGA CACGCCACGG TGATCGGGGA CGAAGGGGCG 
CGACGCGCGG CGACGCACTC GATTCAAAAC TCGCAAGCCG TGCGGTCGAA CGACGACGTC 
GTGAACGGAG ACGAAGCCGG GAATGTGAGG GCGCGCGCGC GGGCGATGGG TGAGGAGGCG 
GCGGCGACGG TCGACGCGAC GAATGCGGAC GGCGCGGCGC GGCGCGGCGC GGCGCCCGGG 
TTGACGCGAA GTCGCGTCGG CGGGCGCGGA GGCGCGACGG GGAGTTCGAG CACGGTGCAC 
GGACACGCAC AGCGGCCGGC GAATAGTGCG GGAGATTCGA ACACGGCGGC GGTGTCGAGC 
GACCGCGCGC GTCCGGTGGA TTCGACCGAG GCGCAGAGGC TTACGAATTC GCGCGGCGAA 
GGCGGGCGCG CGGATTCGGG CCTGGGCAAT AGCGAAGAGG TGGAATGTGG CGACATCAAG 
GCGGCTGGAA GCTTGCTCGC CGGTGAGGGA GGAGCGGCAG GTGTCGGTAC CGAGGTCGAA 
TCGAAGCAAA TCATTCTGCC CGCGCCGACG CGGTGGGATA ATCAAGAACC GTGGGACGTA 
CCGCGAGAAT CGCTCGTTCC GGCGTCGCTC GAGCTCAAGG CTCGCGCGGA TGCGCTCAAG 
GCGATCGAGA ATTTCGGCAC CGCCGAGCGC GCGTACGGAC ACGCCCTGCG ATTTATCGAT 
CAAATTGAAA TGTTTGAAAC CGAAGAGACG GGTGGATCGT CGGAGCGAAA TTCACAGTTG 
AAGACGGCGT GCTTGCTCGA AGCGAGCGCG TGCGCGCTTC GGAGAGCCGA TCCCGTGCGA 
GCGGGTGAAC TCGCAGCTCG CGCGCTCGCG CGCGAACCGA ACAATGCACT CGCACTCAAG 
GCGCGAGCGC TCGCCGCGGT GACCGAGGGA GATTTCGGCA CCGCCATCGG CGACTTGACC 
AAGGCGTTGG AAATGACGCC CGATGATCCG GGGCTCGTCG CGGATTTGCG CGAAGCCACT 
CACCGACGTG ATGTCGCTCT CCACGCACCA CGACGGGGTG GTATCGCATC GTCGTTCATC 
GGCGCACCGG GAGGAGTGTC CTGGGGGACG ATGCCCATGA GCGGCATGGC GGGATCGAGC 
GCGCAGGGCG GGCAACTGTT CTCTTACCCC AACGCCGGCT ACGTCGCCAG CGGTGGCTTG 
GGTATGCACG GTGAAGTTGA GGGGGAAACC GATGGCGCCA TGAGTGCTGG AGTTTTCGGA 
GGTGGGTTCA GCTCTTTCCA AAACGTCGAC GATAACGCTG CCATGGATAC ACGAGCGATG 
CTTGACGGTA CGCACTTGCG CCGACCAGAC AGCCCGTCGC ACGCCACCGG CACGGAATCG 
CGCATGGATC AACCGGGAAC AACTTTCAAT CGCGTCGGTG GTACGCCGAG CGTGAGTAAA 
GGTACGACTA TCTCTATGCA GAAGAATGCG ATGCAGTCGG ATGCCTTTAT GCTCGGTGAC 
GAAAGCGAAG AAGACGGCGA AGAGGTGTGC GGCGGCGGCG GAAAAGAGCC GGTTTCGAGC 
GAATGATGTT AAGCGAGCAA TGTAGACGAC GACTGGATTC GTAA 

 

Protein sequence

MARSAGGSTG AASLATLDAT TSEGDTHLSP MLMRTDGAER LDDDALRASP ERAAATRAAQ 
SSGSAFGMGG AGGAGEARRR GRGTRRGDED ADDDADVERS ARDLDDDGGY ETRMPAVDAA 
AVTRSIENPG HATVIGDEGA RRAATHSIQN SQAVRSNDDV VNGDEAGNVR ARARAMGEEA 
AATVDATNAD GAARRGAAPG LTRSRVGGRG GATGSSSTVH GHAQRPANSA GDSNTAAVSS 
DRARPVDSTE AQRLTNSRGE GGRADSGLGN SEEVECGDIK AAGSLLAGEG GAAGVGTEVE 
SKQIILPAPT RWDNQEPWDV PRESLVPASL ELKARADALK AIENFGTAER AYGHALRFID 
QIEMFETEET GGSSERNSQL KTACLLEASA CALRRADPVR AGELAARALA REPNNALALK 
ARALAAVTEG DFGTAIGDLT KALEMTPDDP GLVADLREAT HRRDVALHAP RRGGIASSFI 
GAPGGVSWGT MPMSGMAGSS AQGGQLFSYP NAGYVASGGL GMHGEVEGET DGAMSAGVFG 
GGFSSFQNVD DNAAMDTRAM LDGTHLRRPD SPSHATGTES RMDQPGTTFN RVGGTPSVSK 
EECDAVGCLY AR