Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15230 |
Symbol | |
ID | 5001583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | - |
Start bp | 878569 |
End bp | 880923 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | |
GC content | 59% |
IMG OID | 640417004 |
Product | predicted protein |
Protein accession | XP_001417630 |
Protein GI | 145346300 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.456459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCGAG GGAGGAAGGA GATGGAGACG GAGGCGGCGC GGACGCGAGA CGACGACGCG GCGAGGGACG CGTCGGGGAG AGGAGGGAAA AAGACGAAGG CGAAAGCGAG CGAGGGGGAG AGGACGAGGA CGCGCGACGC GCGGGACGTC GCGAGCGACG TCGGGGGGGG GTCGGACGGG AAAAAGGTGG GGAGGGGAAA AAAATTGAAC GCGGCGGCGG CGGCGCCGAA GCGCAAGTAT TGGAAGTGCG TGAATTTGGA AGGCGAAAAG TTTGCCGTGG GCGATAGCGT GTACGTGGTG AACGAGAAAA CGGTCGATTT CGATGACGAC GAAGATTGTC CTTGCATGGT GTGCGGTGAA GCGCCGAACG CGGATCGAAT CATGCTCGAG TGCGATACGT GTCTGAGCGG GTGGCACATG TGCTGTCTCA AGCCGCCGCT GACGCGCGTG CCGGAGAGCG ATTGGCACTG TCCGTTGTGT GCGCGGGGCG GGGAGGCCGC GAGCGCGGTG CCGCGAATCG AAACGTTGAC GCGCACCGCG TGCACGGAGT TCATGGCGGG TAGGTTCCAT TTAGCGCGTA TAGAGCACAT TTGGGAAGAG AACGGAGAGT ACCAATTCGC GGCGCGATGG TACGCGCTGC CCGAGGAGAC GCACATGGGA CGCCAACCCA TTCAGCATCG GCGCGAGGTG TTTTTGACGC ATAACGTCGA CGTTAATCCC GTCGATTGCT TATTTCGCGT CGCCAAGGTG TGCACGCCTC AAGAATTCCG AGATCAAGAG GAAGGATCGC ACGACACGTA CGTGTGCGAA TACACGTACG ACACCGCGTT TCAGCGCTTC AAGCGTCGCG GCGAATGGGG CGAAGAGGAC GAATTCAGCG ACGACGATCG CTTTGAGAAT GAATTAGACT GGCGCGACGC AGAGGACGAC GACTGGGACT CGAAGAAAAA GAAGGACAAA AAGTCGGGCG CCAACAGTCG TCTCGCGGGT CGTCTCGCCG CTCGACGGCG TGTGGAAGAC GCGGCGGCGC GTTTGGAGAT TGCTGGTTTC GGTGGCAGCG CTCTCAGTCG TGGTAGGAAG CACCCGTCGA CTGTTTTAGG CGGCGTGCGC GCTGTGTTAT CTCTGGCATC GACGCCGGCG ACGCTGCCGT GTCGCGAAAA CGAACGCAAG CAAGTCTACG ACTTCGTGCA CGAAGCCATC ATGGCGGGTT CGCACAGCAC GGGAAAATGT CTGTACATTT CCGGCGTCCC CGGTACGGGC AAGACGGCGA CAGTTCGCGA AATCATACGG GTCCTTCGTT CGCAAGCGCG CAACGGCGTG ATTCCAAAGT TCAACCACGT TGAGCTCAAC GCGCTCCGTT TGCAAACGCC CAAGCACGCG TACAGCACCA TCGCCGAAGA GTTGATGGGG CAAAAGTTTA GCCCGGACAA AGCGAGCATG GTCTTGGAGA AGAGATTCAA GGAAGGCAAA GGAAGCGATG GACGAGTCAC AGTTCTCATC GTCGACGAGC TTGATTTGCT CGTTACGCAC AGGCAAGACG TGCTGTACAA TATTTTCGAT TGGCCGACTC ACAAGAAGAG TCGACTCGTC GTCATCGGCA TCGCCAACAC GCTCGACGTA CCCGAACGCA TGCTCCCGCG CATCGCGTCT CGACTCGGAA GCAATCGCGC GGCTTTCGCT CCGTATTCCT GGGAACAGCT CAAGAAGATC GTCACCTCGC GTCTGGAAAG TGTCGAGGGA TGCAGCGACG CCTACGCGCC GTCGACCCTC GACTTGATTT GCAGAAAAGT TGCTTCGGTG AACGGCGACG CGCGGCGAGC GCTCGAACTC GCGCGGCGAG CGGCGGAAGT CGCCGAAGCC AGAATTAACG TCGAAAAGGT GACTACTCTC ACTTTGCAAA ACGCGCAACC AGAAGAGGGC GCCGCAGCGC GCGCCAAGGC TCGCATCGAA AAAGTAACCA TGGACGACGT CCGCCAAGCG CAAAGCGAAA TGTTCGACGG TCCGCACATG AAACTCATTC ACGCTGCGAG CTTTTACGAG CGCATGTTCT TGATAGCGTT GGTTAAGGCG CTTCAACGCA CCGGCACGAC CACCGTGGAC ATGGGCACGG TGATGCAAAT GCTCAAGGTG ATGTGCAAAG ATCCGCGCGT AAACGTCGCC GAGCCCCCGA TTGGGAGCGG CGTTCGCATC GCCTCTCGCT TACGTTCCAC GCACCTCATC ATGACGGACG CCTCGACGGC CAGAAATTTA CAACAAATTT CCCTCTCCGT GCCCATGGCT GACATCACGT TCGCGCTGGT GGAGAACTGC GAGAACGACG CGTGCGACAT GCCGTGGGTC AAGCTCGTCC TCTAG
|
Protein sequence | MARGRKEMET EAARTRDDDA ARDASGRGGK KTKAKASEGE RTRTRDARDV ASDVGGGSDG KKVGRGKKLN AAAAAPKRKY WKCVNLEGEK FAVGDSVYVV NEKTVDFDDD EDCPCMVCGE APNADRIMLE CDTCLSGWHM CCLKPPLTRV PESDWHCPLC ARGGEAASAV PRIETLTRTA CTEFMAGRFH LARIEHIWEE NGEYQFAARW YALPEETHMG RQPIQHRREV FLTHNVDVNP VDCLFRVAKV CTPQEFRDQE EGSHDTYVCE YTYDTAFQRF KRRGEWGEED EFSDDDRFEN ELDWRDAEDD DWDSKKKKDK KSGANSRLAG RLAARRRVED AAARLEIAGF GGSALSRGRK HPSTVLGGVR AVLSLASTPA TLPCRENERK QVYDFVHEAI MAGSHSTGKC LYISGVPGTG KTATVREIIR VLRSQARNGV IPKFNHVELN ALRLQTPKHA YSTIAEELMG QKFSPDKASM VLEKRFKEGK GSDGRVTVLI VDELDLLVTH RQDVLYNIFD WPTHKKSRLV VIGIANTLDV PERMLPRIAS RLGSNRAAFA PYSWEQLKKI VTSRLESVEG CSDAYAPSTL DLICRKVASV NGDARRALEL ARRAAEVAEA RINVEKVTTL TLQNAQPEEG AAARAKARIE KVTMDDVRQA QSEMFDGPHM KLIHAASFYE RMFLIALVKA LQRTGTTTVD MGTVMQMLKV MCKDPRVNVA EPPIGSGVRI ASRLRSTHLI MTDASTARNL QQISLSVPMA DITFALVENC ENDACDMPWV KLVL
|
| |