Gene OSTLU_14961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_14961 
Symbol 
ID5001626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp267338 
End bp268558 
Gene Length1221 bp 
Protein Length406 aa 
Translation table 
GC content52% 
IMG OID640417047 
Productpredicted protein 
Protein accessionXP_001417199 
Protein GI145345397 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5256] Translation elongation factor EF-1alpha (GTPase) 
TIGRFAM ID[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.000165599 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGACG ATCGCGTGAT TCAGAAATAC GAGCGAGAGG CGAAGGAGAA AAATCGCGAC 
TCGTGGTACA TGGCGTACAT CATGGATACC AGCGAAGAAG AGCGTGCGAA AGGGAAGACT
GTCGAAGTCG GTCGCGCGCA CTTCGAAACG GAAAAGAAGC GTTACACGGT TTTGGACGCT
CCGGGTCACA AAAACTACGT ACCCAACATG ATCGCCGGTA CGGCGCAAGC CGACGTGGGG
GTGCTCGTTA TTTCGGCGCG TAAGGGTGAA TTTGAAACTG GTTTCGATAA AGGTGGTCAG
ACTCGAGAGC ATGCGCAGCT TGCAAAGACG TTAGGCGTCA CAAAATTAGT CGTCGTCGTG
AACAAGATGG ATGATCCGAG CGTCGAATGG GCGAAGGAAC GTTACGACGA GATTGAAAAG
AAAATCACGC CATTTTTGAA GCAGTGTGGT TACAAGATTG ATGCAGATGT CACCTTCGTA
CCGATCTCGG GCTTGACGGG GGCGAACATG CAGAAGAAGG TTGGATCAGA CGTGTGCTCG
TGGTATGAAG GAAAGTCATT CTTCGACACG CTCGACGATC TCGAGCCGCT TCCTAGAGAC
CCGAACGCTC TGGTAAGATT ACCGGTTATG GACAAATATA ACGAAGCAGG TGCGATGGTC
ATGGGTAAGA TTGAATCTGG TACCTTGCGT ATGGGTCAGA CGCTCATGTT GATGCCAAAC
AAGGCCGGCG TTAAGGTCGC CGCTTTGTTT CGCGACGAAG TGGAATGCAC GAAATGTTTG
CCGGGAGAGA ACGTACGCTT AAAGTTGACG GGTGTTCAAG AAAGTGATAT CCAACCTGGT
TTCGTGCTTT GCAGCGTGAA GGAGCCCATT CACATCTGCG AAGAGATTGA ATGCCAGCTT
GCGCTCTTGG AACTGCTCGA GCACAACTCC GTCTTCACGA AGGGGTACAA GGCTGTGATT
CACATCCACA CGGCAACGGA AGAAGTCGAG GTGACAAAGC TAGTCTCAGA AATCGACACG
AAACTACGCA AACCGAAGGA AGGCAAGCCG AAATTCCTGA AGAGTGGTAG CCTCGGTAAC
GTTCGCCTCC GCTTTGCCCA ACCGGTGTGC GTAGAAAAGT TCGCCGACTA CGCTCAGCTC
GGTCGTTTCA CCTTGCGCGA CGAAGGACGA ACCATCGCCA TCGGTAAAGT GACTCGCCTC
AAACCCAAAT CGAGCGATTA A
 
Protein sequence
MVDDRVIQKY EREAKEKNRD SWYMAYIMDT SEEERAKGKT VEVGRAHFET EKKRYTVLDA 
PGHKNYVPNM IAGTAQADVG VLVISARKGE FETGFDKGGQ TREHAQLAKT LGVTKLVVVV
NKMDDPSVEW AKERYDEIEK KITPFLKQCG YKIDADVTFV PISGLTGANM QKKVGSDVCS
WYEGKSFFDT LDDLEPLPRD PNALVRLPVM DKYNEAGAMV MGKIESGTLR MGQTLMLMPN
KAGVKVAALF RDEVECTKCL PGENVRLKLT GVQESDIQPG FVLCSVKEPI HICEEIECQL
ALLELLEHNS VFTKGYKAVI HIHTATEEVE VTKLVSEIDT KLRKPKEGKP KFLKSGSLGN
VRLRFAQPVC VEKFADYAQL GRFTLRDEGR TIAIGKVTRL KPKSSD