Gene OSTLU_12468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12468 
Symbol 
ID5001480 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009358 
Strand
Start bp570190 
End bp570990 
Gene Length801 bp 
Protein Length185 aa 
Translation table 
GC content63% 
IMG OID640416901 
Productpredicted protein 
Protein accessionXP_001417542 
Protein GI145346121 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.665817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC TGTTCTCCGT CAAGGTGCGC GCGCGACGCG AGGACGACGA CGCGCGACGC 
GCGACCGCGA CGCCGACGCG CGCGACGAAC GACCGCGCGG CGACGCGCGC GACGAAGGAT
GCGACGAAGG ATGCGACGAA GGACTGACGC GACGCGCGCG CGACGACGAC GACAGGCGAA
ACAAGAGAAG GAGGCGGCCG AACGCGAGGC GAACGGAGGC ACGACGTCGA GACAGAGCAG
CGGGGAGGTT CGCGTGGCGA AAGGTGCGCG AGACGGCGAC GCGAACGGGG GAAGCGCGAG
GACGCGGGAC GACGGCGAGA CGACTGACGC GCGCGCGCGA ACGAAACGAA CGCAGACATA
TCGGAGCTCG CGCTTCCGCG GACGATGTCG ATAGCGTTCC CGAATGGGAA GGATGATTTG
TTGAACTTTG TCATCGCGAT TAAACCCGAT GAGGGGTACT ATCGCGGTGG GACGTTTGAG
TTTTCGTTCG CGGTGCCGAC GATGTATCCG CACGAACCGC CGAAGGTGCG ATGCGAGCGC
AAGGTGTATC ACCCGAACAT TGACTTGGAC GGGAACGTGT GCTTGAACAT TTTGAGAGAG
GATTGGAAAC CGGTGTTGTC GATCTCGAGC GTCATCTTCG GGTTGTCTCT GCTGTTCAGC
GAGCCGAATC CGGACGATCC TCTGAACAAG GAGGCGGCGG AGGATTTGGC GCGCACGCCT
CAGAATTTCG CGATGAACGT CCGGCGCGCG ATGCAGGGCG GGTACGTGGG CCAGCACCGA
TTCTCATCGT GCCTGCGATG A
 
Protein sequence
MIKLFSVKAK QEKEAAEREA NGGTTSRQSS GEVRVAKDIS ELALPRTMSI AFPNGKDDLL 
NFVIAIKPDE GYYRGGTFEF SFAVPTMYPH EPPKVRCERK VYHPNIDLDG NVCLNILRED
WKPVLSISSV IFGLSLLFSE PNPDDPLNKE AAEDLARTPQ NFAMNVRRAM QGGYVGQHRF
SSCLR