Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_12468 |
Symbol | |
ID | 5001480 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | - |
Start bp | 570190 |
End bp | 570990 |
Gene Length | 801 bp |
Protein Length | 185 aa |
Translation table | |
GC content | 63% |
IMG OID | 640416901 |
Product | predicted protein |
Protein accession | XP_001417542 |
Protein GI | 145346121 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.665817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC TGTTCTCCGT CAAGGTGCGC GCGCGACGCG AGGACGACGA CGCGCGACGC GCGACCGCGA CGCCGACGCG CGCGACGAAC GACCGCGCGG CGACGCGCGC GACGAAGGAT GCGACGAAGG ATGCGACGAA GGACTGACGC GACGCGCGCG CGACGACGAC GACAGGCGAA ACAAGAGAAG GAGGCGGCCG AACGCGAGGC GAACGGAGGC ACGACGTCGA GACAGAGCAG CGGGGAGGTT CGCGTGGCGA AAGGTGCGCG AGACGGCGAC GCGAACGGGG GAAGCGCGAG GACGCGGGAC GACGGCGAGA CGACTGACGC GCGCGCGCGA ACGAAACGAA CGCAGACATA TCGGAGCTCG CGCTTCCGCG GACGATGTCG ATAGCGTTCC CGAATGGGAA GGATGATTTG TTGAACTTTG TCATCGCGAT TAAACCCGAT GAGGGGTACT ATCGCGGTGG GACGTTTGAG TTTTCGTTCG CGGTGCCGAC GATGTATCCG CACGAACCGC CGAAGGTGCG ATGCGAGCGC AAGGTGTATC ACCCGAACAT TGACTTGGAC GGGAACGTGT GCTTGAACAT TTTGAGAGAG GATTGGAAAC CGGTGTTGTC GATCTCGAGC GTCATCTTCG GGTTGTCTCT GCTGTTCAGC GAGCCGAATC CGGACGATCC TCTGAACAAG GAGGCGGCGG AGGATTTGGC GCGCACGCCT CAGAATTTCG CGATGAACGT CCGGCGCGCG ATGCAGGGCG GGTACGTGGG CCAGCACCGA TTCTCATCGT GCCTGCGATG A
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Protein sequence | MIKLFSVKAK QEKEAAEREA NGGTTSRQSS GEVRVAKDIS ELALPRTMSI AFPNGKDDLL NFVIAIKPDE GYYRGGTFEF SFAVPTMYPH EPPKVRCERK VYHPNIDLDG NVCLNILRED WKPVLSISSV IFGLSLLFSE PNPDDPLNKE AAEDLARTPQ NFAMNVRRAM QGGYVGQHRF SSCLR
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