| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_92477 |
|---|
| Symbol | |
|---|
| ID | 5000755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 682564 |
|---|
| End bp | 684480 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640416176 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416732 |
|---|
| Protein GI | 145344423 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA CCGCCCGGCG CGGCTGGCGC GTTCCCGTGG TGGCGTTCAT CACCGGCGTT
TTCATCGCTA CCGCGGTGTT GACGCGCGAT TACACCGTCG GCGACGACGT GCTCGCCGCG
CTCGTCGCCG GTGAAATCTC GTCGATTAAT GCTCAGGCGA GCGATTTCTC CTCTTTGCCG
ACGCCTCGCG CGCGAGCGAG CGATCCAGAC GTCGACAACG CGCGTTGCTT TGAGCTGTGC
GCGATCTTGC GCGCGGGTGT GGACGCGCGA ACGAGGATTG GGGCGCTGGA GCTGCGGTCC
TCGGCGCGAG CGGCGCTCGC GGCGACGAAA CTGAGCCTGG CTCTTTGGGC GCGCGTGTTC
TCGCCGGCGA CGAACGCGAT AACGGAAGGC GTCGTGCGAG GAACGCGCGC GGGGGGTCGG
AGACTCGCGG TGATCGTGCG GGAGACAGAA CCGAGGGTTC TGGCGCAGTG GGTGCTCGCG
TGCGTCGGCG CGGCGTACGT GTATCACTTG TGCTGGCGGT TCGTCAAGCA CTTGAAACGG
GCGCGATATA GGAACAAGCT TAGGTTTTTC ATCATTAGGA TGAGATTGCG CGCGTCGCGG
CGGGTGCGAA CGGCGTTGGA GCCGTACGCA AGGGTTTATA GGCGAGTCGC GAGCGCCGGG
ACGGCGGTGA AGCGACGATA TTCGCTCGTC GTGCGAGGAA TACGTAGTAA AAGTCGATTG
GCAGCGAACG CGTTGCCGCA TGCGTTGTTT TTAGTCGTCG GGATGGGTGT GTTTCGCGTC
ATGCCGCGAT ATGCGAGGAA TATGGTGCGG AAAAGAGAGA TTTTGGCGAC CATCTCGCTC
CTCGTGCCGA TGTTTCGAAC CATGCTCGCC GTGGAGAGCG AAGACATGGC TCTTGTCGAA
AAATGGTTGC GTTTCTGGGC ATCGTGCGCG CCGTTCATGA TAGCCGTTGA TTTTCCGTTC
ATATTCTACG GTGTTAGGTG GTTCTTTCCG TGGTGGCCCG AAGTTTTAGT GCTGTTTACG
ATGTGGTTGA ACTCGCGCCT CACGCGCGGT AGTCAAATCA TTTTGGAATT TTCCACACCG
CTCGTTTCTC GGGCGATGGC GTACTTGAAC GAGTCCAGTG GTACGACGGG TAAGATTTCC
ATACTTCTTC GTCGTTCGGT TCGACAAGCA CTGCAGATTA GTGTCATCGT CATTCGCTTC
CGTTCCCGAC GAGCCTCAGA GGCGCTCCGC CTCGTTCTCG ACAATATGAG CATTCCGTTG
GTGATGTGTA CGGTGTTTTT CTTCACACCA GGGCTGATGA CGATATACGG TTGCGACATG
GCCGGATTGG TCGTTCCGTT CGCGTTCACG GTGGACGGAT TACTCAAGTA TGCGCAATTG
AAGGCGCAAC CGCAACAGCC CAGTCGCGCG CAAGCTCGCA AGGACTTAGA AAAGCTCCAT
GAAGATAAGC TTCGAAACTG GTTGACTTAC TGGCTCGCAC ATGCGATGAT TTGGTCGCTG
TCGCAAGAGC TTTCAAAAAG CGCACTCGGG TGGTTTCCGC TCTGGCGGCA CACGCAACTG
GCGGGAATTT ACTGGCTTCA AGTATTCGGC GGCTCGCAAC TCATCACGGC GCGCATGCAG
GGTATCAAAC AATCCATCCT AGAGGATCAT CAGAAAGCGT TAAAAGCAGC GATTTCAGCC
GACTTGGACG CGTCCGAAGT CGAGGAACTG GCAAAGTTGA AAAAGACGTT GGACGCCTCG
CAGCCTAGCG TGGAAACGAC GCTCGACGAA ACCTCAATTG ACGACAAGAA GGATGATTCA
AAACCCACCG ATACCGATGG CGACGTCGAC GCGGAAACGA TCACAAAATT AGACGTAGGA
ATCACCGCCG AGACCGTGCG CAAGCGCACG CCGACGGACG CGAACGGCTC GAACTGA
|
|---|
| Protein sequence | MSATARRGWR VPVVAFITGV FIATAVLTRD YTVGDDVLAA LVAGEISSIN AQASDFSSLP
TPRARASDPD VDNARCFELC AILRAGVDAR TRIGALELRS SARAALAATK LSLALWARVF
SPATNAITEG VVRGTRAGGR RLAVIVRETE PRVLAQWVLA CVGAAYVYHL CWRFVKHLKR
ARYRNKLRFF IIRMRLRASR RVRTALEPYA RVYRRVASAG TAVKRRYSLV VRGIRSKSRL
AANALPHALF LVVGMGVFRV MPRYARNMVR KREILATISL LVPMFRTMLA VESEDMALVE
KWLRFWASCA PFMIAVDFPF IFYGVRWFFP WWPEVLVLFT MWLNSRLTRG SQIILEFSTP
LVSRAMAYLN ESSGTTGKIS ILLRRSVRQA LQISVIVIRF RSRRASEALR LVLDNMSIPL
VMCTVFFFTP GLMTIYGCDM AGLVVPFAFT VDGLLKYAQL KAQPQQPSRA QARKDLEKLH
EDKLRNWLTY WLAHAMIWSL SQELSKSALG WFPLWRHTQL AGIYWLQVFG GSQLITARMQ
GIKQSILEDH QKALKAAISA DLDASEVEEL AKLKKTLDAS QPSVETTLDE TSIDDKKDDS
KPTDTDGDVD AETITKLDVG ITAETVRKRT PTDANGSN
|
|---|
| |