| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_86865 |
|---|
| Symbol | |
|---|
| ID | 5001109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 928917 |
|---|
| End bp | 930581 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640416530 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416800 |
|---|
| Protein GI | 145344565 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.241734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGAGG ACGCGCGCGC GCATGGGTAC TGCGTGTACA CGCACGCCGA CTGGGCGCAC
GCGTACGTGA GCGCGGACGG TGAACACGCG TACGAGAGCG CGTGCGCGTT CGGCGCGGCG
CCGGAGGAGC TGCGCGGCGG CACGCTGTAT CGCATCGGAC CCGGGTTGTT TGAGCGCGAG
AAGGAGTACG CGCACATGCT CGACGGTGAT GGTCTAGCGC TGCGATTCAG GTTTTCTTCA
GATGGCGCGT CGGTGGCGTT TACGTCGCGA TTCGTTCGCA CGCGCGAGTT CGCCGAGGAA
GACGCCGCGG GCAAGGTGTT GTATCGAGGA ACGTTCGGGA CCATGCGAGA AGGAGGGATG
TTGAATAATG CGTTCGATTT ACACACGAAA AATTTAGCGA ATACGAATAT CGTGCGATGG
GGCGGTCGCG TGCTCGCGTT GTACGAAGCA GGTCAGCCCG TGGAAGTGGA CGCGGAGACG
CTCGCTACAA AGGGCGTGGA CGATTTAGGC GGTCGACTCG AGCCGGGACA GTACTTCACG
CTCGGGTTAC CGGAACCCAT CGGATCGACG ATCGAACGCT CTGCTGGACT TGGGGGGCGG
GCGTTCACCG CACACCCGCA CATTGACTCC AACACCGGAT ACTTGGTCGG TTGGGGATGG
AAATCTCGCA TCACCGCCAA GGCGGTGGAG ATTTCGCTGT GGGAGTGGGA TGAAGATTGG
CGCGAGATGG GAAGACGCGA CTACGTTATG GAGGGCTGCG AGGCCGCGCC GCACGATTTC
GGTGTGACAG AAAAGTGGTA CGTGATGATT CAAAATCGAC TCGGCATCGA TCCTCTACCG
TTTCTCGTCG GGGCCAAGGG CGCGGGTGAG TGCCTGATTT CGCAGCCGCA AGAACCACTC
CTCGTGCACT TGATCCCGCG CTCGACGCAG ACGCCGAATG TGGCGAAACC GGTGGAACCC
GTGATCGCCG AAGGGCCTCG AGAATCGTTC GAGATACACG TGGCGCTCGC GCACGACGGG
CCACCTTTGA GCCGCGGCGA GACGACGTCG GAAGATCTCG AGAACTGGGT CACCGTGTAC
ACCGCGGGCT GGGACAAGCT TTCTCCTGGT GTGTTCCTCG GCGAGTGGGG CTCAAGCGAC
CCTTGGCCGT TTCCAGTGCC CACGGAGTTG AGTCCAGACT TTAACAACAT CCCGAGAACG
CTGTTGTGGA TGTATGAAAT CAACGCCGTC ACCGGGGAAG TGAAGCGTCA ACCGGCGCCA
GGTTGCGAAG ATTTGTGCAT CGACCATCCG CACGTGTCGC CGTTATTCGA GGGCAAGCGC
GCGTGTCGGT ACGTGTACGC TTCGTTGAGT AACGAAGTTC GCGTCAGCGG ACCGCCGCTT
GGTTACGTGC GCATCGACCT AAAGACGGGC GAATTGCAAA AGTGGTACGC GAGCAACCGA
AGCTTTTGCG AAGAACCAGT CATCGTGCCG AAAGCGAACG GCGCAAACGA AGACGATGCG
TGGTTGATCG GGCTGATCGC GGACCATTCG CGGGAGAACC CAGCTGGGAT TTCACGAGTC
GTCGTTCTTG ACTGCGCCGA CATAGCCGCG GGCCCGGTGT GTAGCATTCC TCTGCGCAAT
AGAATCCCAC ACGGGCTGCA TGGAATGTTT GTCGGTCGAG AATGA
|
|---|
| Protein sequence | VLEDARAHGY CVYTHADWAH AYVSADGEHA YESACAFGAA PEELRGGTLY RIGPGLFERE
KEYAHMLDGD GLALRFRFSS DGASVAFTSR FVRTREFAEE DAAGKVLYRG TFGTMREGGM
LNNAFDLHTK NLANTNIVRW GGRVLALYEA GQPVEVDAET LATKGVDDLG GRLEPGQYFT
LGLPEPIGST IERSAGLGGR AFTAHPHIDS NTGYLVGWGW KSRITAKAVE ISLWEWDEDW
REMGRRDYVM EGCEAAPHDF GVTEKWYVMI QNRLGIDPLP FLVGAKGAGE CLISQPQEPL
LVHLIPRSTQ TPNVAKPVEP VIAEGPRESF EIHVALAHDG PPLSRGETTS EDLENWVTVY
TAGWDKLSPG VFLGEWGSSD PWPFPVPTEL SPDFNNIPRT LLWMYEINAV TGEVKRQPAP
GCEDLCIDHP HVSPLFEGKR ACRYVYASLS NEVRVSGPPL GYVRIDLKTG ELQKWYASNR
SFCEEPVIVP KANGANEDDA WLIGLIADHS RENPAGISRV VVLDCADIAA GPVCSIPLRN
RIPHGLHGMF VGRE
|
|---|
| |