| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_7849 |
|---|
| Symbol | |
|---|
| ID | 5000692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 400429 |
|---|
| End bp | 401001 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640416113 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416936 |
|---|
| Protein GI | 145344848 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1584] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.161215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA TGACGATGAA ACCACCGATC GCTAACGTCG GCACGCTCGG TCTGTGGGCG
TTCGCATTGA CGACAGCTAT GCTGAGTGTG AAGGAGCTTC GCGTGGGCGC CTCGGACGAC
GGCGCCGTGG GCGTGACCAT CGGGTTCGCC TTTGGATTCG GTGGCTTAGT CCAACTTCTC
GCGGGTATCC TTTCTGCACT TCGAGGACAA AGTTTCAGCG CCGTGGCGTT CGCGTCGTAC
GGCGGATTTT GGCTTTCATA CGGGACGTAC GAAGTGTTGG CGTATGAAGC CGTCATCCCT
CGCGATAAAG TCGCCGAAGA AGCCATGTTG TTCATGTGGG GATTTCTCAC TCTTGTGCTC
TTCTGTGCGT CGTTGAACAC GAACGTTGCG ATAAGTTCGC TGTTTTTCAC CCTCGCGGCA
CTGTTTTTCC TGCTCGGTGG GGCGAAGGAT TCGGGAAGCT CTGCTCTTAA ACTCGTCGCG
TCGTTGTTCG GCGTGGGCGT CTCCATCATA GCGTTTTACG CCGGCGCCGG TGAGCTGATA
AATGAACAGT ACGGCAAGAC GATCATCCCA CTA
|
|---|
| Protein sequence | MQTMTMKPPI ANVGTLGLWA FALTTAMLSV KELRVGASDD GAVGVTIGFA FGFGGLVQLL
AGILSALRGQ SFSAVAFASY GGFWLSYGTY EVLAYEAVIP RDKVAEEAML FMWGFLTLVL
FCASLNTNVA ISSLFFTLAA LFFLLGGAKD SGSSALKLVA SLFGVGVSII AFYAGAGELI
NEQYGKTIIP L
|
|---|
| |