Gene OSTLU_7010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_7010 
Symbol 
ID5000599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp535646 
End bp536164 
Gene Length519 bp 
Protein Length173 aa 
Translation table 
GC content58% 
IMG OID640416020 
Productpredicted protein 
Protein accessionXP_001416976 
Protein GI145344928 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5080] Rab GTPase interacting factor, Golgi membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0535161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.263342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGAGGGTCGT ACGCGCACGT CGAGGACGAG GTGCCGTTGC TCGAGGAACT CGGCGTGGAT 
CCGAAGCAGA TTTATCGTCG GACGATGGGT GTGATGCATC CGTTCAGGGT CGAGGATAGC
ACGGATGAAG ATCTCGCGGG ACCGCTGTTG TTTTGTCTCG TCATGGGCGC GTGTAACTTA
CTGGCGGGGA AGTTGCACTT TGGGTACATT TTGGGTTGGA GCACGCTCGC GTCGCTCGGG
ATGTACTGGT TGTTGAACCA AATCATCGGC GGAGGGGAAG GGATCGGGTT GAACCGGTGC
GGGAGTATTT TAGGCTACGC GCTGCTGCCC GTGGTGGGGT ACAGTGGGAT CGTGCTGTTT
TTACCTTCGA AAACTGGGAT GTTGAGCAAG GCGCTCGCGG TGCTCTGCGT GACGTGGAGC
TCGAGAAAGG CGAGCGTGGG GTTGATACAG GCGATGCCGC AGTCGGAGGG CAAACGCATG
ATCGTGACGT ATCCTTGCAT GATGCTTTAC ACGCTGTAC
 
Protein sequence
GGSYAHVEDE VPLLEELGVD PKQIYRRTMG VMHPFRVEDS TDEDLAGPLL FCLVMGACNL 
LAGKLHFGYI LGWSTLASLG MYWLLNQIIG GGEGIGLNRC GSILGYALLP VVGYSGIVLF
LPSKTGMLSK ALAVLCVTWS SRKASVGLIQ AMPQSEGKRM IVTYPCMMLY TLY