Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_7010 |
Symbol | |
ID | 5000599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | - |
Start bp | 535646 |
End bp | 536164 |
Gene Length | 519 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 58% |
IMG OID | 640416020 |
Product | predicted protein |
Protein accession | XP_001416976 |
Protein GI | 145344928 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5080] Rab GTPase interacting factor, Golgi membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0535161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.263342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGAGGGTCGT ACGCGCACGT CGAGGACGAG GTGCCGTTGC TCGAGGAACT CGGCGTGGAT CCGAAGCAGA TTTATCGTCG GACGATGGGT GTGATGCATC CGTTCAGGGT CGAGGATAGC ACGGATGAAG ATCTCGCGGG ACCGCTGTTG TTTTGTCTCG TCATGGGCGC GTGTAACTTA CTGGCGGGGA AGTTGCACTT TGGGTACATT TTGGGTTGGA GCACGCTCGC GTCGCTCGGG ATGTACTGGT TGTTGAACCA AATCATCGGC GGAGGGGAAG GGATCGGGTT GAACCGGTGC GGGAGTATTT TAGGCTACGC GCTGCTGCCC GTGGTGGGGT ACAGTGGGAT CGTGCTGTTT TTACCTTCGA AAACTGGGAT GTTGAGCAAG GCGCTCGCGG TGCTCTGCGT GACGTGGAGC TCGAGAAAGG CGAGCGTGGG GTTGATACAG GCGATGCCGC AGTCGGAGGG CAAACGCATG ATCGTGACGT ATCCTTGCAT GATGCTTTAC ACGCTGTAC
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Protein sequence | GGSYAHVEDE VPLLEELGVD PKQIYRRTMG VMHPFRVEDS TDEDLAGPLL FCLVMGACNL LAGKLHFGYI LGWSTLASLG MYWLLNQIIG GGEGIGLNRC GSILGYALLP VVGYSGIVLF LPSKTGMLSK ALAVLCVTWS SRKASVGLIQ AMPQSEGKRM IVTYPCMMLY TLY
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