| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49086 |
|---|
| Symbol | |
|---|
| ID | 5000958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 174897 |
|---|
| End bp | 176462 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640416379 |
|---|
| Product | MFS family transporter: sugar (sialic acid) |
|---|
| Protein accession | XP_001416575 |
|---|
| Protein GI | 145344098 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0133076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCG CGAGAGGGGG ACGCGGGGAG GAGGCGCGAG AACGCGGCGA CGTCGCGGCG
CGCGCGAGAG CCGAACGACG CGATCGACGG GACGCGGTCG CGGCGAGCGG GAGCTCGAAG
ACGACGCGCG AGGATCGGGA CGAGGGCGAG GAGGATCCGG ACGAGGCGTG GGCGTTTGAG
TTTCCGAAGT CGGCGAGCGA CGTCACGACG CTCTGGCGAG GCGCGCCGAG TCGGTATCGC
GTGCTCTTCG TCACGGTGTT CGCGTTCATC GTGTGTAACA TGGATAAGGT GAATATTTCG
GTGGCGATCA TTCCCATGGC GCGGGAGTTC GGGTGGACGA GCACGCAGGC GGGGTTCGTG
CAGAGCGCGT TTTTTTACGG TTTCGCGGCG TCGCAGTTAC CGGGCGGGTA CTTGTCGACG
AAATTCGGTG GTGCCAAGGT GTTGCCGATC GGGATGTTGA TTTTGTCGTT GGCGACGATC
GCGATTCCGA TCGTCGGCGT GAACGAGCAG AGCATTTTCC TGTCGCGCGT GCTCGTGGGT
TTGGGCGAAG GCGTGGCGCC GAGCGCGGCG ACGGATATCA TCGCGAGAAG CGTCAGCGTG
GGCGAGCGTT CGCGCGCCGT CGGGTTCGTG TTCAGTGGGT TCAACATAGG TTCGGTGCTT
GGTTTGGGGG TGGCGCCACT ATTGATAGAG GCGACGAATT GGAGGACGGT GTTCGCATTC
TTCGGCTCGT GCGGTTTAGT TTGGAGTTTT TGGGCTTGGA AGCTGTACGG CGACGGCGGG
ATGGTTGACG AAAGTTACAA GGACGACGGC GTCACGGGTT TGACGGGTAA GCGCATATTC
ACCGTCGACG CAAAGGCGAT AGCGAGCGGG AAGAGCCCGG CGGAAGACCC TCCGGTGCCG
TGGGGGGAGT TTATATCGAA TCCGTCGGTG CGCGCGCTCA TGTACGTGCA CTTTTGCAAC
AACTGGGGCT TCTACGTCCT ACTCGCTTGG CTTCCGACGT ACTTTACCGA CGAGCTCGGG
GTGACACTGA CGAACGCATC GCTGTTGACT CTGCTTCCGC CGCTCGCGAA CGTCGCGATG
GCGTCCGTCG CCGGTCCGAC TGCGGACCGC CTCATCGGCA GCGGCATGGA GATCACGAAG
GTGCGTAAAA CGATGCAAGC AGTCGCCTTC ATGGGACCGG CGCTCGCCAT GGGCTCGGCC
GCATTGGTAG ATCAGCCGGT GGCGACCGTG GGTCTGCTCA CGCTCGGCCT TTCGCTAGGC
GCGTTTTCGT ACGCGGGTTT GTACTCAAAC CATCAAGATT TGTCGCCCAA GTACGCGAGT
ATCCTGTTGG GCATGACAAA CACGTGCGGC GCGCTTCCGG GCGTCATCGG CGTTCCGTTG
ACTGGGTACT TGATCAAAGA AACGGAAAAT TGGGAGCTTA GCATGTTCGT TCCGGCGATG
TTCTTCTACT TTACGGGAAC GCTCGTATTC AGCAAGTACG GCAGCGGCGA TCGACAAGCG
TTCACGGGAC AACCTATGCC CGAACCAGGC GAGATTCCGC CATCGTGCGA TGGCGGCGGA
CATTAA
|
|---|
| Protein sequence | MGRARGGRGE EARERGDVAA RARAERRDRR DAVAASGSSK TTREDRDEGE EDPDEAWAFE
FPKSASDVTT LWRGAPSRYR VLFVTVFAFI VCNMDKVNIS VAIIPMAREF GWTSTQAGFV
QSAFFYGFAA SQLPGGYLST KFGGAKVLPI GMLILSLATI AIPIVGVNEQ SIFLSRVLVG
LGEGVAPSAA TDIIARSVSV GERSRAVGFV FSGFNIGSVL GLGVAPLLIE ATNWRTVFAF
FGSCGLVWSF WAWKLYGDGG MVDESYKDDG AIASGKSPAE DPPVPWGEFI SNPSVRALMY
VHFCNNWGFY VLLAWLPTYF TDELGVTLTN ASLLTLLPPL ANVAMASVAG PTADRLIGSG
MEITKVRKTM QAVAFMGPAL AMGSAALVDQ PVATVGLLTL GLSLGAFSYA GLYSNHQDLS
PKYASILLGM TNTCGALPGV IGVPLTGYLI KETENWELSM FVPAMFFYFT GTLVFSKYGS
GDRQAFTGQP MPEPGEIPPS CDGGGH
|
|---|
| |