| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_49043 |
|---|
| Symbol | |
|---|
| ID | 5000865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 255025 |
|---|
| End bp | 257014 |
|---|
| Gene Length | 1990 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640416286 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416598 |
|---|
| Protein GI | 145344145 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02343] T-complex protein 1, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0141345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGGCGGCCCG CGACGGAACC ATGTCGCTGG CGTTCGATGA GTTCGGGCGA CCGTTCATCA
TCATCAAGGT GCGAGGGCGA CGAACGAGCC GTCGCGGTAT CCGCGCGCGC GGCGGACGAA
CGAACGGACG CGCGCGCGCG ACGTGCGCGC GCGATGGTGA AGGACTCGCG CGATGCGATC
GGGACACTGA CGCTGGAACG CGTTTGTCGT TTACGCGATG CAGGAACAAG GAGCGAAAAC
GCGCGTGCGC GGGATCGATG CTCAGAAAGC GAACATCGCG GCGGCGAAGA GCGTCGCTCG
AACGCTTCGG TCTTCGCTCG GGCCAAAGGT GAGATGAAGA CGCGGCGACG CGCGCGACGT
TTGACTTTTT CGTAAAGCGA AGCGAGACGC GATTCATTCG CGCGGCGACT GACGAGAGGC
GACGCGATGT CGCGAAATAT CGTAGGGTAT GGATAAGATT TTACAGTCTG GCGACGGCGA
CATCACGATA AGTGCGTGTG CGATTTCGAA ACTCGAGGCG AAGCGCTCGC GAGGTTTGAC
TTTCGAACGC GATGACTGAC GGTCATTTTA TCTCGCAGCA AATGATGGAG CGACTATTTT
GGATCAAATG GAAGTCGAAC ATGAGATCGG TAAGCTCATG GTTGAGCTGT CCAAGTCGCA
GGACTACGAG ATCGGTGATG GGACGACCGG CGTGGTGGTT TTAGCGGGCG CGCTGTTGGA
GCAAGCCGAG TCACTTCTTG ACCGCGGTAT CCATCCCCTT CGAATCGCGG AAGGCTACGA
GATGGCGTCC AAGGTGGCGA CAAAGGAGCT GGCAAGAATC AGCGAAAAGT TCGAATTCGA
TGCGGAGAAT ATCGAACCGT TAATTCAAAC GTGTATGACG ACGCTGAGTA GTAAGATTGT
GAACCGGTGC AAGCGCGAAA TGGCAGAGAT TTGCGTGAAG GCTGTGATGG CGGTGGCCGA
CTTAGAACGT AAGGATGTGA ACTTAGACTT GATTAAGGTT GAAGGCAAGG TGGGCGGCAA
GCTAGAAGAT ACCATGTTGG TGAACGGTAT CGTGTTGGAC AAGGACATCA GCCACCCGCA
GATGGCGAAG GAGATTAAGG ACGCAAAGAT CGCCATCTTG ACTTGCCCTT TTGAGCCGCC
AAAGCCGAAG ACGAAGCACA AGATTGAAAT CGACACGGCG GAAAAGTACG AGGAGCTCCG
TCAGCAAGAA GAAAAGTACT TTAACGACAT GGTGAAGCAA TGCAAGGACT GTGGCGCGAC
GCTCGTCATT TGCCAGTGGG GTTTTGATGA CGAGGCAAAT TCGATGCTCA TGCAGCAAAA
GCTTCCCGCC ATTCGCTGGG TCGGTGGTGT CGAGCTTGAG CTTTTGGCTA TCGCCACTGG
CGGTCGTATC GTACCGCGAT TCACGGAGTT AACGCCAGAG AAACTCGGTT CAGCGGGCAT
GGTGAAGGAG GTTTCGTTTG GAACGACTAA GGAACGCATG GTAATCATTG AAGACTGCGC
CGCGAGCAAA GCGGTCACAG TCTTCGTGCG CGGCGGCAAC AAAATGATGG TTGATGAAAC
GAAGCGTTCT CTGCATGACG CGATCTGTGT TGCTCGCAAC TTGGTTCGAT CGAACAACAT
TGTGTACGGC GGCGGTTCTG CTGAAGTTGC GTGCGCAATC GCCGTCGAGG AGGAAGCCGA
CAAGATTCCA AGCGTCGAGC AATACGCCAT GCGCGCCTTC GCGGACGCTC TTGACGCTGT
TCCGAACGCT TTGGCCGAAA ACAGCGGCCT TCCTCCGATC GAGAGCGTGG CCACGATCAA
GGCGCAGCAA TTGAAGGACA AGAATCCGTT CCTCGGCGTC GACTGCAAAG AAATTGGCAC
CAACGACATG AAGTCTCAGG GCGTGTTCGA GACTCTCATC GGCAAGCAGC AACAAATTTT
GCTCGCCACG CAAGTCGTCA AGCTCATTCT CAAGATTGAC GACGTAATCT TAGCGGGAGA
AGGGCAGTAG
|
|---|
| Protein sequence | MSLAFDEFGR PFIIIKEQGA KTRVRGIDAQ KANIAAAKSV ARTLRSSLGP KGMDKILQSG
DGDITITNDG ATILDQMEVE HEIGKLMVEL SKSQDYEIGD GTTGVVVLAG ALLEQAESLL
DRGIHPLRIA EGYEMASKVA TKELARISEK FEFDAENIEP LIQTCMTTLS SKIVNRCKRE
MAEICVKAVM AVADLERKDV NLDLIKVEGK VGGKLEDTML VNGIVLDKDI SHPQMAKEIK
DAKIAILTCP FEPPKPKTKH KIEIDTAEKY EELRQQEEKY FNDMVKQCKD CGATLVICQW
GFDDEANSML MQQKLPAIRW VGGVELELLA IATGGRIVPR FTELTPEKLG SAGMVKEVSF
GTTKERMVII EDCAASKAVT VFVRGGNKMM VDETKRSLHD AICVARNLVR SNNIVYGGGS
AEVACAIAVE EEADKIPSVE QYAMRAFADA LDAVPNALAE NSGLPPIESV ATIKAQQLKD
KNPFLGVDCK EIGTNDMKSQ GVFETLIGKQ QQILLATQVV KLILKIDDVI LAGEGQ
|
|---|
| |