| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_45056 |
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| Symbol | metH |
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| ID | 5000739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | - |
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| Start bp | 755139 |
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| End bp | 759017 |
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| Gene Length | 3879 bp |
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| Protein Length | 1252 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640416160 |
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| Product | B12 dependent methionine synthase |
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| Protein accession | XP_001417046 |
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| Protein GI | 145345071 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00353368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.902557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATTCGTTGA AGAAGTCGGC GGCGTTCGAC GTCATCGAGG GTATCATGCA AAAGCGCGTG
ATGGTGATCG ACGGCGCGAT GGGAACGGCG GTGCAAAAGT ACAAGCTGAG CGAGGATGAC
TTCCGTGGTG ATCGTTACAA GAATCATACG CATGACTTGA AGGGGAACAA CGACATCTTG
GTGCTGACGA AGCCGGAGGT TATCTCTGAA ATCCACGAGG CGTATCTCGC CGCGGGCGCC
GACATCATCG AGACGAACAC GTTCTCTTCG ACGATGATCG CGCAGGCGGA CTACGAGCTC
GACAAGAAGG AAGAAGTGCG CGACATGAAC TTGGCCGCTG CTCGCTTGGC GAAGGCGGCG
TGCGTGAAGT TTACGGAGCA AAATCCGGCC AAGCCGCGCT TTGCCGCCGG CGCCATTGGT
CCGACGAACA GAACACTCTC GGTGTCTCCA TCCGTCGAGA ACCCGGCGTT CCGCGCGTGT
ACGTTCGACG AGATTGTTGA CGCGTACTAC GAGCAGATTG AGGCACTCGT CGAGGGTGGT
GTGGACTTGA TTTTGGTTGA AACGATCTTT GACACGCTCA ACGCCAAGGC GGCGATTTTC
GCCATTGAGA AGTTCTTTGA GGCTTACGGT ACGCGTCTTC CGTTGTTCAT CTCCGGCACC
ATCGTCGACA ACTCCGGTCG TACCTTGTCT GGCCAAACGA ACGAGGCGTT CTGGAACTCC
GTCAGCCACG CCAAGCCGAT GGCTGTTGGC TTGAACTGCG CTCTCGGCGC CAAGGACATG
GTCCCGTACA TTGAGAACTT GAGCAAGTGC GCCGACTGCT GGGTGTTCGC GTACCCTAAC
GCCGGTTTGC CGAACGCCAT GGGTGGTTAC GATCAAAAGG GTGCTGAAAT GGCCGAAGAC
TGCCGCGTCT TCCTCGAGAA GGGGTTGTTG AATGGCATCG GTGGCTGCTG CGGCACCACG
GATGACCACA TCGGCGCTCT CGCCCAGATG GTGGCACCGT ACACGCCGCG CAAGAAGCAC
GATGTGCCAG AAATTATGCG CATCTCCGGT CTCGAGCCGT TCAACTATGT GCCGAACGAA
AATGACTACC GCAAGACGTT CATCAACCTC GGTGAACGGT GCAACGTTGC GGGCTCGTCC
ATCTTCAAGA AGGCCATCGT CGATGGTAAC TTTGAGAAGG CTCTCGCCAT CGCGCTCAAG
CAAGTCGAGC ACGGTGCGCA CGTCATTGAC ATCAACATGG ACGACGGCTT GATCGACGGC
GAAACTGCCA TGTCTCGCTT TGTGAACTTG CTCGTTTCCG AGCCGGACGC CTCCAAGGTT
CCTTTCATGA TTGACTCTTC CAAGTTCCAC GTCGTCGAGG CTGGCTTGAA GTGCAGCCAA
GGCAAGTGCA TCATGAACTC TATCTCCCTC AAGGGTGGTG AGGAAGAGTT CTTGCATCAC
GCGAAGATCG TGAAGCGTCA CGGCGCCGCC GTCGTCGTGA TGGCGTTCGA CGAGGAAGGG
CAAGCGGCGA CTGAAGCTGA GAAGGTGCGC ATTTGCTGCC GCGCTTACAA GCTCTTGGTC
GAACAGCTTG GCTTCAACCC GCAAGACATC ATCTTTGACC CGAACATTCT TACGATCGGC
ACGGGCATGG AAGAACACAA CAACTACGGC GTTGACTTCA TCAACGCTAC TCGCGAGATC
AAGCGTCTCT GCCCTGGTTG CAAAATCAGC GGAGGCGTGT CCAACTTGGC CTTCTCCTTC
CGCGGCAACG AGCCCGTGCG CCGCGCGTTC CACAGCGCCT TCTTGTACCA CGCCTGCAAG
GCCGGTATGG ACATGGGTAT CGTGAACGCC GCGCAAGTCG AAGAGGATGT GTACGAGAAG
ATGGACAAGG AGTTGTTGGA ATACGTCGAA GACGTGCTCT TGAACAGATG CACCAACGCC
ACTGAGCGCA TGCTCGAATT TGCGGCGACG CTTGACCCGA AGTCCACTCC TTGCAACCTT
CGCAAGAAGG GTGCCGCTGG CGGTGGTGCC GTGAAGGCTG CTGGGTCGGG TAAGGAATGG
CGTAACCAGC CGTGCGAAAA GCGACTCGAA TATGCCCTCA TCAAGGGGAT TGACGAGTTC
TGCATCGCTG ACACGGAAGA GTGCCGCGTG GGCGACAAGT ACAAGTCTTG CCTGGAAGTC
ATCGAAGGTC CACTGATGGA CGGCATGAAT GTGGTTGGTG ATCTCTTTGG CGCCGGTAAG
ATGTTTTTGC CGCAAGTTAT TAAATCTGCC CGTGTGATGA AGAAGGCTGT CGGCCACCTT
ATCCCTTTCA TGGATGCGGA AAAGGCTCTC ACCGGCAGCA CTGAAGCCAG TACCGCCGGT
ACCTTTTTGA TCGCCACGGT GAAGGGTGAC GTGCACGACA TCGGTAAGAA CATTGTTGCC
GTCGTTTTAG GGTGCAATAA CTTCAAGGTT ATTGACATTG GCGTGATGTG TCCCTGTGAA
AAGATTTTAG ATGCGGTGAG AGAGAGCAAG GCTGACATTT TGGGTCTTTC GGGCTTGATC
ACACCGTCAT TGGATGAGAT GGTGACCGTC GCAAAGGAGA TGGAAAAGGC AGGTATGAGA
ATCCCGCTTC TCATCGGCGG TGCGACGACG TCTAAGATGC ACACTGCGGT GAAGCTGACG
CCAAACTACT CCGGCGGTGT GATTCACGTT CTCGATGCCT CGCGTGCGGT GCCAGTGGCT
CAGACCTTGT TGGACAAGAG GAAGCACGCT GACTTCATGG ACGACATCAA TGAAACGTAC
GCTGAGATGC GTGACGAATT TTACGCTGGT TTAGAGGATC GTAAATACCT TACCCTCCAA
AAGGCGAGAG CAACTGTGAA ACCGGTGGAC TTCACCGCCG CGCCGAATGT CCCTGTCACT
CCCAAGTTCT GCGGAGCCAA GGCGATGGAG GTGTCGATCG ACGATGTGCT TCCGTACATT
GACTGGAATC CGTTCTTCCA GGTGTGGCAG CTGCGTGGTC GCTACCCGAA CCGTGGCTAC
CCGAAGATTT TCAACGATGA AACTGTCGGC CCCGAGGCGA AGAAGCTCTT CGACGAGGCC
AACGCGATGA TCACAAAAAT CAAGCAAAAC AAGAGACTTA CTCTCAAGGG TATTTATGGT
TTCTACCCGG CCAACTCCGT TGGCGATGAC ATCGTCGTTT ACACAGATGA AAGCCGGACA
ACGACGCACC ACACTTTCTA CACGCTCCGC CAGCAAGCCG AAAAAGACAC CGACGAGCCG
TACATGGCGC TCAGTGACTT CATCGCCCCG AAGGATAGCG GTGTGAAGGA TTACCTCGGT
ATGTTCGTGT GCTCTGCTGG ATTTGGTCTC GATGAGCTTA CGGCCGAGTT CAAGGCTGCG
AACGACGATT ACTCCTACAT CATGGCGGAA GCCTTGGCTG ATCGCCTCGC TGAAGCGTTC
GCGGAGTTGC TCCACGAGCG CGTCCGTAAG GATGACTGGG GTTACGCCAA GGATGAGTCT
TTCAACTGCG AAGACTTACT CAAGGTGAAA TATCAAGGCA TTCGTCCAGC GCCGGGTTAT
CCGTCCCAGC CAGATCACAC GGAAAAGGCG ACAATGTGGG ACTTGATGAA GGTCAAGGAA
GAAATTGGCG TCGAACTTAC CGAGACGTTC GCCATGCTTC CCTCGGCCTC GGTCTCTGGC
TTGTACTTCG CAGGCGCGTG CTCTGAATAT TTCAACGTCG GTAAGCTTAC GTCTGACCAA
GTTGAAGAAT ACGCGGGCCG CAAAAAGATG GAGCTCTCTG AAGTGCAACG CTGGTTGGGA
CCGAACTTGA GTTATGAACC TTAGACACGA TCGAAGAAAT CGCGACCCTT AGACCCACCA
TCGAACGAGT TGCCACGCAT TGTAAACATT TTTCATTTA
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| Protein sequence | MQKRVMVIDG AMGTAVQKYK LSEDDFRGDR YKNHTHDLKG NNDILVLTKP EVISEIHEAY
LAAGADIIET NTFSSTMIAQ ADYELDKKEE VRDMNLAAAR LAKAACVKFT EQNPAKPRFA
AGAIGPTNRT LSVSPSVENP AFRACTFDEI VDAYYEQIEA LVEGGVDLIL VETIFDTLNA
KAAIFAIEKF FEAYGTRLPL FISGTIVDNS GRTLSGQTNE AFWNSVSHAK PMAVGLNCAL
GAKDMVPYIE NLSKCADCWV FAYPNAGLPN AMGGYDQKGA EMAEDCRVFL EKGLLNGIGG
CCGTTDDHIG ALAQMVAPYT PRKKHDVPEI MRISGLEPFN YVPNENDYRK TFINLGERCN
VAGSSIFKKA IVDGNFEKAL AIALKQVEHG AHVIDINMDD GLIDGETAMS RFVNLLVSEP
DASKVPFMID SSKFHVVEAG LKCSQGKCIM NSISLKGGEE EFLHHAKIVK RHGAAVVVMA
FDEEGQAATE AEKVRICCRA YKLLVEQLGF NPQDIIFDPN ILTIGTGMEE HNNYGVDFIN
ATREIKRLCP GCKISGGVSN LAFSFRGNEP VRRAFHSAFL YHACKAGMDM GIVNAAQVEE
DVYEKMDKEL LEYVEDVLLN RCTNATERML EFAATLDPKS TPCNLRKKGA AGGGAVKAAG
SGKEWRNQPC EKRLEYALIK GIDEFCIADT EECRVGDKYK SCLEVIEGPL MDGMNVVGDL
FGAGKMFLPQ VIKSARVMKK AVGHLIPFMD AEKALTGSTE ASTAGTFLIA TVKGDVHDIG
KNIVAVVLGC NNFKVIDIGV MCPCEKILDA VRESKADILG LSGLITPSLD EMVTVAKEME
KAGMRIPLLI GGATTSKMHT AVKLTPNYSG GVIHVLDASR AVPVAQTLLD KRKHADFMDD
INETYAEMRD EFYAGLEDRK YLTLQKARAT VKPVDFTAAP NVPVTPKFCG AKAMEVSIDD
VLPYIDWNPF FQVWQLRGRY PNRGYPKIFN DETVGPEAKK LFDEANAMIT KIKQNKRLTL
KGIYGFYPAN SVGDDIVVYT DESRTTTHHT FYTLRQQAEK DTDEPYMALS DFIAPKDSGV
KDYLGMFVCS AGFGLDELTA EFKAANDDYS YIMAEALADR LAEAFAELLH ERVRKDDWGY
AKDESFNCED LLKVKYQGIR PAPGYPSQPD HTEKATMWDL MKVKEEIGVE LTETFAMLPS
ASVSGLYFAG ACSEYFNVGK LTSDQVEEYA GRKKMELSEV QRWLGPNLSY EP
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