Gene OSTLU_34467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_34467 
Symbol 
ID5001004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp457779 
End bp459356 
Gene Length1578 bp 
Protein Length525 aa 
Translation table 
GC content58% 
IMG OID640416425 
Productpredicted protein 
Protein accessionXP_001416668 
Protein GI145344288 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.250133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTT TCGCGGGACG GGTGGACGCG AGGCGCGGCG GAGGACTCGA GGGGGCGACG 
ATCGGCGAGG TGCGGTGCAC GGCGAAGGAG AGGGAGGTGT TCGACACGCT GTTGGCGGTG
GTGGAACACT TTAAGCTGGA CGTGACGCTT CGCGTGGCGG GGGGGTGGGT TCGGGATAAG
CTCGTCGGAC GCGAGAGCGA CGACATCGAC GTGGCGCTGG ATACGATGTT GGGGAAAGAG
TTCGCGGAGA AGGTGAACGC GTACTTGGAG GCGCAGGGGA TGGAGACGAA GGGGATCGGA
GTGATTCAGA GCAATCCTGA GCAGAGTAAG CACTTGGAGA CGGCGACGAT GCGCGTGCGA
GACGTGTGGT TGGATTTAGT AAACTTGCGC TCGGAAAACT ATTCCGAGGA CAGTAGGATT
CCGGAGATGC AGTTCGGCAC GGCCAAGGAC GACGCGTTCA GGCGGGATTT GACCATCAAC
GCCTTGTTTT ACAACATTAA CGAGAAAAAA GTGGAGGATT TCACCGAGCG CGGGATTGAG
GATTTGAGTC GCGGCGTCGT GCGCACGCCG CTCCCGCCGC GAACGACGTT TTTGGACGAT
CCGTTGCGGA TTTTGCGCGC CGTTCGCTTC GCCGCGCGAT TCGGTTTCGA TGTGGACGAA
GAGATCGGGG CGAGCGCGAG TGATCCGGAC GTGCAACACG CATTGAAGCA TAAAGTGAGT
CGAGAGCGTT TTGGAAAGGA AGTCTTGGGG ATGCTCAAAG GACGCTCTCC CGCGGACGCG
GTGGCGCTCA TGGCGGCGTT CAAGATTTCC CCGATCGTCT TACAGGTTCC CACGCAAAGC
GTTGTGGATG CCGTCACGGA CGCGGCGGAC CGCTTGTCAC AATACTCCAC GAGATGCGTC
GAAGGCGCGC TCGAAGAAAT CGCATCAACC GACGCTTGGA TGGACGAAGA GAAGCGGGTG
TGGTTGTATC TCGCCTCGTG GTTGTTGCCG TACCGCGAAT TGCAGTCGGA CGGAAAGAAA
GGAAAGAAGG TTCCCGCGGT GGGCGACATC ATCAGTAACG CACTCAAGCT CCGCTCGAAA
GATGCGGAAA CGACGGTGCA CGTGCATGAA TCGATGGCTC TCGCAAAAAC CTTGTTGACG
AACAAAGACT TTACTCGGCT TGAGGGCGGC TTAGCGCTGC GAAAGATGGG TGAGACGTGG
CGTCTTGCCG TGCTCTTAGA AGCTTTATGC GCCGTCGTGC CCGGCATGAG CGATGCCGAG
GTCCCGACTT GGGCAGGCGA ATACGCGTTC GAACCGGACG CCGCGCCTGC GGATGTGCGC
GAGCGCGTCG CCGCGGGCGT GAAAGCCGCC GTAAGTAAAT TTGAGGCGGT CGAGCAGCGA
GTTGCATCGC TCGAATTGAA CGAGTGTTGG GAGACTAAGC CACCAGTCAC CGGACAAGAC
GTCATGGCGG CGTTGAACAT GACGAAAGGA GGTCCAGAGT TGAAAAAGTG GATCGATAAA
TCCGTGGAGT GGGCGCTAGA AAATCCAAAC ATCACGAAGG AGGAGTGCGT GGAGAAGATA
AAGCAGGGCG GGCATTAA
 
Protein sequence
MRFFAGRVDA RRGGGLEGAT IGEVRCTAKE REVFDTLLAV VEHFKLDVTL RVAGGWVRDK 
LVGRESDDID VALDTMLGKE FAEKVNAYLE AQGMETKGIG VIQSNPEQSK HLETATMRVR
DVWLDLVNLR SENYSEDSRI PEMQFGTAKD DAFRRDLTIN ALFYNINEKK VEDFTERGIE
DLSRGVVRTP LPPRTTFLDD PLRILRAVRF AARFGFDVDE EIGASASDPD VQHALKHKVS
RERFGKEVLG MLKGRSPADA VALMAAFKIS PIVLQVPTQS VVDAVTDAAD RLSQYSTRCV
EGALEEIAST DAWMDEEKRV WLYLASWLLP YRELQSDGKK GKKVPAVGDI ISNALKLRSK
DAETTVHVHE SMALAKTLLT NKDFTRLEGG LALRKMGETW RLAVLLEALC AVVPGMSDAE
VPTWAGEYAF EPDAAPADVR ERVAAGVKAA VSKFEAVEQR VASLELNECW ETKPPVTGQD
VMAALNMTKG GPELKKWIDK SVEWALENPN ITKEECVEKI KQGGH