| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34446 |
|---|
| Symbol | |
|---|
| ID | 5000654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 428096 |
|---|
| End bp | 428680 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | |
|---|
| GC content | 68% |
|---|
| IMG OID | 640416075 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416944 |
|---|
| Protein GI | 145344864 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.693948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0400957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA CGGCGCTCCT GCGCGCGTCC GGCGCGTGCG CGCGACGCGG TCGACGCATC
GCCGCGTCCG CGCGCGCGGC GTCGTCCGCG TCCTCGACCG CGCGGTCCAC GCGCGCGGTC
CCGCTCGTCG TCGTCGTCGT CGGCAAGGGC GGCGGCGCGA AAGTCGACGA CGCGGTCGAC
GAGTACGCGC GGCGGTGCGC GCGCTACGCG CCGTTCGAGG AGAAGACGGT GAAACAAAAC
CCGAAGAACG TCAAGGATAC CGAGCTGCAG AAGGTTCACG AGGGCGAGCG GGTGATGCGG
GCGATCACGG CGCGGGATTA CGTCGTGCTG CTGGACGAGC GCGGGCGGGA CGCGTCGAGC
GAGGAGGTGG CGGAATTGGT GGCGAGGATC GGGGACGAGG GCTACGAGCG AGGGGTGTTC
GTTTTGGGTG GGCCGTTCGG ACACGGGAAA GACGTGATCG ATCGAGCGAA CGAGAGCCTG
CGGTTGTCGA AGATGGTGCT GAATCATCAA GTGGCGAGGT TGGTGGTGAC GGAGGCGTTG
TATCGAGCGC ACACGATTTT ACGCGGCGAA CCGTATCATC ACTAG
|
|---|
| Protein sequence | MATTALLRAS GACARRGRRI AASARAASSA SSTARSTRAV PLVVVVVGKG GGAKVDDAVD
EYARRCARYA PFEEKTVKQN PKNVKDTELQ KVHEGERVMR AITARDYVVL LDERGRDASS
EEVAELVARI GDEGYERGVF VLGGPFGHGK DVIDRANESL RLSKMVLNHQ VARLVVTEAL
YRAHTILRGE PYHH
|
|---|
| |