| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34381 |
|---|
| Symbol | |
|---|
| ID | 5001112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 392208 |
|---|
| End bp | 393338 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640416533 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416933 |
|---|
| Protein GI | 145344842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.693095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.168449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCTG ATGGTCAAGG TTACGCGGCG ACGACGCCGT CGTCGTCGAG GAAACACGCG
AATTTGTACG TGAAGAACAT CTCCGAACGC GTCGACGAGT TGACGCTTCG AAGGCTCTTC
GAGGCGTGCG GGGAGGTGCA ATCGTGCTGC GTCATTCGCG ATGTGTCGAC GAATAAGAGT
CGAGGATTTG GGTTCGTTAA GTTTGTCAGC ACGGCGCGCG CTGAGGACGC GATCGAGCGA
TTCAACGGTA AGGAATACGC GGGAAAGATG CTCGAGGTGA AATTCGCGAA CACCGACGGC
GAGAGCGACG GCGCGGGGGG CGCGGCAAAC GCGCCGCCGA GTGATAACGT CTACGTCAAA
GGTCTGCCCC CTTCTTGGAC GCACGATGAT CTGAAGGCAT TTTTTACGCA TTTTGGGCAC
ATTGTTGAGT GCCGTTTGCT CCACGCAAAC AGGAGCACGT CGAGCGGGGC GTTGATTCGA
TTTTTGCGCG AGTCCGAAGC CACGGCGGCG GTCACGCGCG CCAACGGGCG CTTGCTCGTC
CCCAATGGGC CGCCACTCGT CGTGCGCTAC GCCGAGGCGC AAGGAAAAAA TAATAAACGT
TCAACGCAAG TTGTACCCGT GAATACTCAG CGCCTGTCGA ACAACACGGA CGACTCCGCG
CACGACGGGG GGGAGTTGAT CGACGTCCTC GGCTCGAGTA TGAATCTCAA CCGCATATCT
TCCCAGAGCG GTCTCACTGA ATTACTCAGT GTTGGCCCGC AAGACGGAGA CGACTTTGCC
GCGCTTGCGG TGCTCGGTTC GTCCCCTTCG CATAAATTCG ATGCTCCTAT GCAATCCCAT
CAAAAGTTCG CGTCGGCGAC TTCGATGGCG CAAGGTGGCG CTACGATGTG TATCCAAAAT
CTTCCACCCG CTGCGGATGA ATTATTCCTG TACAAAACAT TTGCTCCGTT CGGAGCTATC
AACTCCGTCC AAATTGTCCG CGACGATTGG ACTGGTCTTT GTTCTGGCGT CGCTGTGATA
AACTTTCGAA GTTACTCCGA CGCTTGCGAC GCTCAAAGAG CGTCTCAAAA CGGAAAGAGC
AGGCTGAGCA TTTCTGTTCA GCTTCAGACG GCGAATCTGG CGAACTTTTA A
|
|---|
| Protein sequence | MYSDGQGYAA TTPSSSRKHA NLYVKNISER VDELTLRRLF EACGEVQSCC VIRDVSTNKS
RGFGFVKFVS TARAEDAIER FNGKEYAGKM LEVKFANTDG ESDGAGGAAN APPSDNVYVK
GLPPSWTHDD LKAFFTHFGH IVECRLLHAN RSTSSGALIR FLRESEATAA VTRANGRLLV
PNGPPLVVRY AEAQGKNNKH DFAALAVLGS SPSHKFDAPM QSHQKFASAT SMAQGGATMC
IQNLPPAADE LFLYKTFAPF GAINSVQIVR DDWTGLCSGV AVINFRSYSD ACDAQRASQN
GKSRLSISVQ LQTANLANF
|
|---|
| |