| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34199 |
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| Symbol | |
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| ID | 5000688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | - |
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| Start bp | 127901 |
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| End bp | 129316 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640416109 |
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| Product | predicted protein |
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| Protein accession | XP_001416852 |
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| Protein GI | 145344673 |
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| COG category | [A] RNA processing and modification
[T] Signal transduction mechanisms |
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| COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.499516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGC CGGTGTCCGT GGCGCCGAAG CAGCAGCAAC AACAGAAGAA GATCATCACG
CGCGAAGCCA AGCGCATGCT TCGCGACGTC ATGGACGAAC TGCGACGGGT GCAAACAGTC
GACGCGAGTG GTAAGAATCT CGGTGACGAA GGTACGTGCT TCATCGCCGA AGCGTTCGCG
TACAATAACG TGGCTACGTG CGTGGACATG AGCGCGAACG GCATCGGCGT CGAGGGCGTC
ACGGCGCTTT GCGAGGCGCT GAAGTGTAAC GACACGCTGA CGATGTTGTC GCTCGCGAGT
AACTCGCTGG GCGACGAAGG TGCGAAGGTG TTGGCGGACT ATCTCAAGAC GGATGAAAAG
ATTACAACCA TCAACTTGAA CGCGTGCTCG ATCGGCGACG AAGGCGCCAG GGCAATCGCC
GAGGCGCTCA AGACGAACAC CACCATCACT TCCCTCGAGA TGAACAACAA TATGGTCGAT
TACGAAGGTT CAGGCGCGCT CGCTCAGGCG TTTGCGCAGA ATAGCACGGT GGAGTTGCTC
GCTCTGAGCG GCAACTACGT CGGCACTCTC GGCGCCGCGG CGCTCGGCGC CGCGTTCAAG
GAGAACACTG GGTTGCGCTC TCTCCAATTG AACGGAAACG ACATAGGCAA CGAAGGTTGC
ATCAAGCTCT GTGAGGGACT GGCGGCGCGC AAAGATAAAA TTAACAACTT GGACCTCGGC
AACAACTCCA TCGGCCCCGA AGCAGGACCG GCGCTTCGCG ATTATCTCAA GGACGACGAC
GCGTTGACGC ATCTCAACCT GTACATGAAC GAGCTCGCAA ACGACGGCTG CGCCGCTGTC
GCCGAATCGC TCAAAGATAA CAAGAAGATA GAGCTTCTTG ATATCGGTGG GAACAACATC
GGCGCTTTCG GCGCCGAGAA GCTTGCTGAA GCGTTGCGAG ACAACGAATC CTTGGTGACG
CTCGAACTCG GGTACAACCC GATCGGTGTC CCCGGTGGCA AGGCTCTCGC AGAGACGGTG
AAATTTCATG GTAAATTAAA TACCATGCGT ATGGGCTGGT GTAAAATTGG CAAGGAAGGC
GGCTTCGCAT TCGCGGATGC GATCAAGTAC TCGAGCTCGC TCGCGGTGTT GGATTTGCGC
GGCAACGACC TTGGCGACGA CGGCGTTGCG GCGCTCGCGC AGTCGCTCGG CGTCGTCAAC
GAAGTATTGA CCAACCTCGA CCTCGGTTAC AACGAAATCA AGGACAAGGG CGCTTTCGCT
CTGGCGCAGG CGATCAAGAA CAATGCAGAC GGTTCCTTGC AAACGCTCTC CATCAACAAC
AACTACTTGA CCAAATTCGG CGAAGTCGCC CTCACGGAGG CGGTCGAGTT GGTTCAGGAA
ATGAACGCCG ATCGCGACCT GTACGTGCAG TTCTAA
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| Protein sequence | MDGPVSVAPK QQQQQKKIIT REAKRMLRDV MDELRRVQTV DASGKNLGDE GTCFIAEAFA
YNNVATCVDM SANGIGVEGV TALCEALKCN DTLTMLSLAS NSLGDEGAKV LADYLKTDEK
ITTINLNACS IGDEGARAIA EALKTNTTIT SLEMNNNMVD YEGSGALAQA FAQNSTVELL
ALSGNYVGTL GAAALGAAFK ENTGLRSLQL NGNDIGNEGC IKLCEGLAAR KDKINNLDLG
NNSIGPEAGP ALRDYLKDDD ALTHLNLYMN ELANDGCAAV AESLKDNKKI ELLDIGGNNI
GAFGAEKLAE ALRDNESLVT LELGYNPIGV PGGKALAETV KFHGKLNTMR MGWCKIGKEG
GFAFADAIKY SSSLAVLDLR GNDLGDDGVA ALAQSLGVVN EVLTNLDLGY NEIKDKGAFA
LAQAIKNNAD GSLQTLSINN NYLTKFGEVA LTEAVELVQE MNADRDLYVQ F
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