| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34148 |
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| Symbol | |
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| ID | 5000936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | + |
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| Start bp | 585721 |
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| End bp | 587121 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640416357 |
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| Product | predicted protein |
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| Protein accession | XP_001416703 |
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| Protein GI | 145344361 |
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| COG category | [A] RNA processing and modification
[T] Signal transduction mechanisms |
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| COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0271154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.859268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAC TCACGACAAA GGACGTCCGC GCGTACGCGA GAGCCATCGG GACGCGATTG
CGAAAGATAA CGTGCGATTT GGGACATAAA ATTTTGTATG ACCCGATAAG GCGCGATCCC
ACGGCCAAGT ACGTCGACGT TTATGACGAT AACGTGCAGG ATTTGGTGGA AACGTTGGCC
ATCCCGCAAC TTCACGTTCG GCGTCTGAAA TTGCATAGCT CGGATCCAGG GAGCGTTCGA
GCGGCGGCGG TGGCGGCAGC ATCCAATGGA CCGAATAAAG TGGAGTCGTT CGATGCGAGC
TGGAGCTTGA GAATTTCAAA CGAAGGCGCT CGCGCGGTTG CAGAGGTGCT TGCTCAAGGT
TGGGATTTGA AGCGTCTCGC GTTACGCAAA GTGAACATCT CCGATGACGG CGCGGTGAGC
TTGGCTGAGG CCATCAAGGC ATCGGCGGAA AGTGGCACAA GTAAACTTCG ATGGCTCGAT
CTCGGATCAA ACGACGTACG AAGCCGAGGT GCGGTGGCAA TTGGCGAGGC GCTCGAGCAT
CCGGGCGTGA ATATTACTCG CTTGACGCTT CGGGGCAACG GCATATGCTC TGAGGGTATG
GATGCACTCG GCAAAGGTAT CTCGATGTCG AGCACGCTTC GTCGCATTGA TCTTGCACAC
AACGGTTTCG GAGATCGAGG TGCGATCGCG TTCGCAGACG CGCTCTCGCG TGGCACGGCG
CCGAATCTCC GAGTCCTTCT TCTCGGCTTT AATTCAATCG GCCCGGATGG TATGCGTGCT
TTGATGCAAG CGTTGATGCA TACGGACGTG GAGCACTTGG ACGTGGGATG TAACGTTATT
GGAGCGTCGG GTGCGAAAGC TATCGCCGAA ATGATCAACT CGACGCGTCT TAAAAGTCTC
AATCTTGCGT GCAACAACAT TGGCTTGCGA GGCGAGCGTT CGGGCCTCAC TGCTTTGGCG
AAGGCTTTGG AGAAGAACAA AACGCTCGAG ATTTTGAATT TACGCGGAAA TGCGCTGCAC
ACAAATTGCG CTCAAGATAT TGCGGACGTC TTGTTAGAAG AGACGGCGCT AATTCAGCTC
AACGTCGGAT ACAACGAGCT GTACGACAAT GGCGCATGGG AAATCGCAGA GGCGCTCGAG
GAAAACACCA CGCTTCTTGG CTTGGATTTT CAGCGCAACG AAGTCACTGA CGCTGGCGCG
AGTAACATTG CCAAGACATT GGCAGTAAAT TCTATCATTC AGGAAATCGA TTTGCGAAGT
AACATGATCA GCTCCGAGGG CGTCGCGAAA CTTCAGCCGT ACGGGTTGAA GACGAATACT
CGCTGGCAAC TCGAGCCTCC GAAGTACAAG GAGAAGCCGA AACCGCGTTT TTCCGCTCGG
AAGCCAAAGG CAAATAAGTA G
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| Protein sequence | MGKLTTKDVR AYARAIGTRL RKITCDLGHK ILYDPIRRDP TAKYVDVYDD NVQDLVETLA
IPQLHVRRLK LHSSDPGSVR AAAVAAASNG PNKVESFDAS WSLRISNEGA RAVAEVLAQG
WDLKRLALRK VNISDDGAVS LAEAIKASAE SGTSKLRWLD LGSNDVRSRG AVAIGEALEH
PGVNITRLTL RGNGICSEGM DALGKGISMS STLRRIDLAH NGFGDRGAIA FADALSRGTA
PNLRVLLLGF NSIGPDGMRA LMQALMHTDV EHLDVGCNVI GASGAKAIAE MINSTRLKSL
NLACNNIGLR GERSGLTALA KALEKNKTLE ILNLRGNALH TNCAQDIADV LLEETALIQL
NVGYNELYDN GAWEIAEALE ENTTLLGLDF QRNEVTDAGA SNIAKTLAVN SIIQEIDLRS
NMISSEGVAK LQPYGLKTNT RWQLEPPKYK EKPKPRFSAR KPKANK
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