| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34049 |
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| Symbol | |
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| ID | 5000580 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | - |
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| Start bp | 507159 |
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| End bp | 509088 |
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| Gene Length | 1930 bp |
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| Protein Length | 542 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640416001 |
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| Product | predicted protein |
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| Protein accession | XP_001416968 |
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| Protein GI | 145344912 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02340] T-complex protein 1, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.013996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.104894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC AATCCGACGT CTTCTTCGGC GAGCGCGAGA GCGGACAGGA CGTGCGACAG
ACGAACGGTG CGGCGCGCGG ACGACGACGA GCGACGAAGC GCGAGCGAAC GAGGGACGCG
ATCTCGAACG CGATGGGACG AGGACGACGA TCGACGATCG ACGATCGACG GGACGCGCGA
CTTCGAGCGG GGAGACGGAG ACGGAGACGG AGACGGAGAC TGACGACGAC GCGCGCGCGA
CGCGGGATGC GAACAGCGAC GGCGGTCATG GCGGTGGCGA ACATCGTGAA GACGTCGCTC
GGGCCGGTGG GACTGGACAA GGCGCGTGAC GAAGACGCGA AGGCGTTGAC TTTGAGGACG
AGACGCGGAG AATCGACGAA ACGATGCGCG CGCGCGGTGA GGGACGAGGA CTGACGGAAT
GAAAGGGTTT GACGCGTAGA TGCTCGTGGA TGATATCGGT GACGTGACGA TCACGAACGA
TGGGGCGACG ATTTTGAAAC TTTTAGAGAT TGAACACCCG GCGGCGAAGA TCTTGGTCGA
GCTCGCCGAG TTGCAGGATC AGGAAGTGGG AGATGGAACG ACTTCGGTGG TGATTCTCGC
CGCGGAGCTT TTGAAGCGGG CGAATGAGTT GGTGAGGAAT AAGATTCACC CGACGAACAT
CATCGCTGGG TTCAGGTTGG CGATGCGAGA AAGCGTCAAG TACGTCGAAG GTAAGTTGGC
GAGAGACGTG GAGACGCTCG GGAAGGAAGC CTTGTTGCAG TGCGCAAAGA CGAGCATGAG
CTCGAAAATC ATCGGTGCCG AAGAAGATTT CTTTGCGGAT TTGGTCGTCG ATGCGTGCAC
GAGCATCAAG ACGTACAACG ACATGGGCGA CGTCAGGTAT CCCATCAAGG CGATCAACAT
TTTGAAGGCG CACGGGAAGA GCTTGAAGGA GTCATCGGTG TTGCACGGAT ACGCCCTTAA
CCTCGGTCGT GCGGCGGAAG GGATGCCAAA GTTAGTCAAG AATGCAAAGA TTGCGTGCAT
CGACTTCAAC TTGCAGAAGA CAAAGATGTT GATGGGGATT CAAGTGCTGG TGAACGACCC
GAAGGAACTC GAAAAGATTC GCGAGCAAGA GTTTGAAATC ACCGCCAATC GCATCAAGAT
GATCTTAGCC GCCGGTGCCA ATGTCGTGCT CTGTTCTAAG GGCATCGATG ATATGGCGCT
CAAGTACTTC GTCGAGGCTG GGGCTATCGC CTGTCGTCGC GTCAATCGTG ATGATTTGCG
CCGCATCGCC AAGGCGACGG GGGCGCAAGT GATGCTGTCT CTGTCCGACA TGGATGGTGG
AGAAACTTTC GACGAGTCCA TGCTTGGCAC TGCGGGCGAA GTGGTGGAGC AACGCGTGGC
TGATGATGAT ATGGTCGTCA TCAAGGACTG CGCGAGCACC CAATCGTGTA CAATTCTCTT
GCGAGGCGCA AACGATTATA TGCTCGACGA GATCGACCGC TCGGTGCACG ACGCACTGTG
CATCGTGAAG AGGACGTTGG AAAGTGGCAA GGTTGTCGCT GGTGGTGGCG CCGTCGAAGC
TGCGTTGAGC ATTTATCTGG AGAATATGGC GACTACTCTG GGTAGCCGGG AGCAGCTCGC
CATCGCCGAG TTTGCCAACG CGCTCTTGGT CATCCCAAAG GTACTCTCTG TCAACGCTGC
GAAGGATTCC ACCGATCTCG TGGCCAAGCT TCGAGCTATT CATCATCAAG CACAGAGTCA
AGGTAACGAA GAGCTCGCCG GGATGGGCTT GGATCTCGTC AAGGGCGAAC TTCGCGACAA
CATCGCCAGC GGTGTCCTCG AGCCGGCGTT GAGCAAGGTG AAGAGCATCC AGTTTGCCAC
TGAAGCTGCG ATTACGATTC TCCGCATCGA CGACTTGATT CAACTCGAAC CCGAACAGGA
GGGTCAGTAG
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| Protein sequence | MRRQSDVFFG ERESGQDVRQ TNATAVMAVA NIVKTSLGPV GLDKARMLVD DIGDVTITND
GATILKLLEI EHPAAKILVE LAELQDQEVG DGTTSVVILA AELLKRANEL VRNKIHPTNI
IAGFRLAMRE SVKYVEGKLA RDVETLGKEA LLQCAKTSMS SKIIGAEEDF FADLVVDACT
SIKTYNDMGD VRYPIKAINI LKAHGKSLKE SSVLHGYALN LGRAAEGMPK LVKNAKIACI
DFNLQKTKML MGIQVLVNDP KELEKIREQE FEITANRIKM ILAAGANVVL CSKGIDDMAL
KYFVEAGAIA CRRVNRDDLR RIAKATGAQV MLSLSDMDGG ETFDESMLGT AGEVVEQRVA
DDDMVVIKDC ASTQSCTILL RGANDYMLDE IDRSVHDALC IVKRTLESGK VVAGGGAVEA
ALSIYLENMA TTLGSREQLA IAEFANALLV IPKVLSVNAA KDSTDLVAKL RAIHHQAQSQ
GNEELAGMGL DLVKGELRDN IASGVLEPAL SKVKSIQFAT EAAITILRID DLIQLEPEQE
GQ
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