Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_30781 |
Symbol | lhcp2.4 |
ID | 5000601 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | + |
Start bp | 737460 |
End bp | 738789 |
Gene Length | 1330 bp |
Protein Length | 233 aa |
Translation table | |
GC content | 62% |
IMG OID | 640416022 |
Product | prasinophyte light harvesting complex, chlorophyll binding |
Protein accession | XP_001416747 |
Protein GI | 145344454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.260173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGGCATACCT GCACACGCAC ATTTCTACAA TGTCTGCCCT TCTCGCTTCC TCCTTCGTCG GCCGCGTCGC CGCCTTCAAG GCGACCAAGA TCCAAGTGCG TATTTTTTAG CCTTCGCGCG ACGCGCGACG ACGCGCGGGA CGACGACGCG CGCGAGGGAC GCGATCGCAT CGCGCGCCAT CGATCGACGG CGTGAGATAC GCGACATCGC GCGCGCGGCG CGCATCGCGT CGTCGCGACG CGGGACGTGC GACGCCGCGA AGGGCGTCGC GGGAAGCGAT GTCGATGATT ATTTGTGATC GCGACGCGAC GCGCGTCGGC GTCGCGACGC GTCGCGACGG GCGAGCGGGC GCTCGATCGC CGCGGCGATA GGATAACCGC GATACGGATA TTTTCTATCT GTTTGTTTGA CTGGACGAAG CGCGGGCGCG GGGCGGAGGA CGCGGGTGAT TGGATCGATC GTTCGAGCGA AGAGAGGAGA CTGACGAAAG AAACGCGATG TGTTTTACGA AATGAACAGG CCAAGTCTGT CTCCACGACG GTCAAGGCTG ACATCTACCC GGAATTCGGT ACCTACCCGG GCGGTGGCGA ATCCCCGATC ATCCCGTTCG GCGACGAAAA GAACGCCGAG CGTGAAGTGA TCCACGGCCG CTGGGCGATG CTTGGCGTCA CCGGTGCGTG GGCCGCCGAA AACGGCACCG GCATCCCGTG GTTCACCGCG GGTACCTTGT GCACCCCGGA TGACTGCACC GCCGTCGCGG ACAAGTTCCC GGGCGCCGTC GCCCCGCTCG CGCCGGAAGG CTCTGGCTAC CCGTCCTTCT GGAACGTTCT CATCATCGAG ATCGTTCTCG TCGGCGCCGC GGAAGCGTAC CGTACCGGTA TCTCCGACTC TCCGTTCGAT GATGGCCTCA CCGTCGGTGA CGTCAACCCG GGTGGACGCT TCGACCCGCT CGGCCTCGCC GAGTCTGGCG ACCTTGAAGA ACTCAAGATC AAGGAGCTCA AGCACTGCCG CTTGTCCATG TTCGCGTGGT TGGGCTGCAT CTTCCAAGCG CTCGCCACCC AAGAAGGCCC GATCGCCAAC TGGCAATCCC ACGTTGCGGA CCCGGTTCAC TCCAACGTCC TCACCAACGC GGCCAAGGGC TTCGGCTTCT ACTAAGCGGT TCACCGCCTT GGTAGCTTCG TCATAGGGTA GCTTGATCGG CGGCCGTCGA CTTCGCGTCT ACGGTCACCT CCAAGATTTC TCTGACAGCG CTGGGAATTC CCGACTGCTT TTGGGGCTTT GTCTCTTCAA TAACATTCGT TTTAATGATG CATCTCTCGA TGTTTGATTA
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Protein sequence | MSALLASSFV GRVAAFKATK IQAKSVSTTV KADIYPEFGT YPGGGESPII PFGDEKNAER EVIHGRWAML GVTGAWAAEN GTGIPWFTAG TLCTPDDCTA VADKFPGAVA PLAPEGSGYP SFWNVLIIEI VLVGAAEAYR TGISDSPFDD GLTVGDVNPG GRFDPLGLAE SGDLEELKIK ELKHCRLSMF AWLGCIFQAL ATQEGPIANW QSHVADPVHS NVLTNAAKGF GFY
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