Gene OSTLU_30754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30754 
SymbolRPL10 
ID5000568 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp698979 
End bp699938 
Gene Length960 bp 
Protein Length226 aa 
Translation table 
GC content60% 
IMG OID640415989 
ProductRibosomal protein L10, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001416736 
Protein GI145344432 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR00279] ribosomal protein L10.e 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.484174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCAG AGCCATGGCG CGACGACCGG CGAAATGCTA TCGCGTGATT AAGAACAAAC 
CGTACCCGAA GTCTCGTTAC TGCCGGGGCG TGCCGGGTGC GTGCGGTGAC GCGACGACGC
GCGCGGAACG AGCGATCGAA TAACCCTAAA ACGAACGCGC GACTGACGAC GAACGCGCGA
CGCGTGCGAT GATGCGCAGA TCCTAAGATT CGCATTTACG ATGCGGGGAT GAAGAAGTAT
TCGTGCGACG CGTTCCCGGC GTGCGTGCAC CTCGTGAGGT ACGTATCGAG CGATGACGCG
CGCGTGATGA TGGGCGCGAG AGACCTAAAC CGTGCGCGGA GCGCAGGGAC GGTGATGCGC
GTGGGGGGAC GCGCGCGACG CGTGCGATGG GTGACGGAGG ATGAGGACTG ACGAGACGTT
ATTTTTACAT CGACGCGCAG TTTCGAAAAG GAGCAAATCG GCTCTGAGGC GATGGAGGCG
GGACGTATCG CGGCGAACAA GTACATGGTG ACCAAGGCTG GGAAGGAAGG TTTCCACCTT
CGCGTGCGCT TGCACCCGTT CCACGTGTTG CGCATCAACA AGATGTTGTC GTGCGCGGGT
GCGGATCGCT TGCAAACGGG TATGCGTGGT GCGTACGGTA AGCCGCAAGG TGTCGCCGCG
CGAGTGTCCA TTGGTCAAAT CATGTTGTCG ATTCGAACCA AGGATGTGCA CGCGGACAAG
GCTGTCGAGG CGTTCCGTCG TGCCAAGCAC AAGTTCCCGG GCCGCCAAAA GATTGTCAAG
TCTAAGCAGT GGGGTTTCAC GAAGTACTCC CGCGATGACT ACATGAAGTG GAAGGATCAA
GGCCGCATTG AGCCGGATGG TGTCAACGCG AAGATCGTCC AACACCACGG TCCGCTCGCG
GCCAAGCCGG CGAGCCAACT CTTCCTCAAC GCGGCTCGCA GGTACAAGGT TGCCCTTTAA
 
Protein sequence
MARRPAKCYR VIKNKPYPKS RYCRGVPDPK IRIYDAGMKK YSCDAFPACV HLVSFEKEQI 
GSEAMEAGRI AANKYMVTKA GKEGFHLRVR LHPFHVLRIN KMLSCAGADR LQTGMRGAYG
KPQGVAARVS IGQIMLSIRT KDVHADKAVE AFRRAKHKFP GRQKIVKSKQ WGFTKYSRDD
YMKWKDQGRI EPDGVNAKIV QHHGPLAAKP ASQLFLNAAR RYKVAL