Gene OSTLU_30578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30578 
Symbol 
ID5000867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp406821 
End bp407690 
Gene Length870 bp 
Protein Length289 aa 
Translation table 
GC content59% 
IMG OID640416288 
ProductMC family transporter: carnitine/acylcarnitine 
Protein accessionXP_001416649 
Protein GI145344249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0764841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CGAAGGATGT GTTCGCGGGG ACGTGCGGCG GGGTCACGGT GACGCTGCTG 
GGGCACCCGT TCGACACGGT GAAGGTTTTG TTGCAGACGC AGAGCAGTAA GAATCCGGTG
TACTCGGGGG CGGTGGACGC GGCGAGCAAG GTGATCAAGG CGGAGGGCGT GGGAGGATTG
TATCGTGGGG TGACGTCGCC GCTCGCGGGA CAGATGTTCT TCCGGGCGAC GCTGTTTTTT
GCGTACGCGC GCGCGAAGGA ATTCGTGGGG GTGTCTCCGG AGGACCCGCT GAGTTACGCG
AAGGCGGGCG CGATGGCGTG GTTGGCGGGG ACGTTCTTTG AGTCTCCGAT CGATTTGTAC
AAATCGCAGT GGCAATGTCA ACTCGTCAAG GCGAAGGCTG ATCCCACGTA CAAGTCGCCG
TACGGAAGCG TGGTGGACGT CGTCAAGGAG TCGTGGAAGT ACAACGGCGT TCGCGGGCCG
TACCAGGCGT TTCACGCGAC GATGGCGCGG AACTTGCCCG CCGGCGCGGT GTACTTTGGG
GTGTTTGAAA ACGTGAAGAA CTCGTTCGCG AAGACGAACG AGGATGGAAA AGCGACGAAC
GCGCAAATTA TTTTATCCGG AGGCATCGGT GGTTTCTTTT ACTGGTCGTT GTTCTATCCC
ATCGACGTCA TCAAGAGCGC CTTGATGACG GACGCCGTGA ACCCGGCCAA GCGCAAATTT
ACCGGATTCT TCGATGCCGC GGGCAAGCTG TACGCCTCGG GCGGCGTCAA GGCTTTTTAC
AGAGGCCTTG TCCCGTGTCT CTTGCGCGCG TCTCCCGCCA ACGCGGGTAT GCTCTTCACG
GTGGACTACA TTCGGCGCAT CATAGATTGA
 
Protein sequence
MKFAKDVFAG TCGGVTVTLL GHPFDTVKVL LQTQSSKNPV YSGAVDAASK VIKAEGVGGL 
YRGVTSPLAG QMFFRATLFF AYARAKEFVG VSPEDPLSYA KAGAMAWLAG TFFESPIDLY
KSQWQCQLVK AKADPTYKSP YGSVVDVVKE SWKYNGVRGP YQAFHATMAR NLPAGAVYFG
VFENVKNSFA KTNEDGKATN AQIILSGGIG GFFYWSLFYP IDVIKSALMT DAVNPAKRKF
TGFFDAAGKL YASGGVKAFY RGLVPCLLRA SPANAGMLFT VDYIRRIID