| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_30536 |
|---|
| Symbol | |
|---|
| ID | 5001025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 342380 |
|---|
| End bp | 343036 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640416446 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416630 |
|---|
| Protein GI | 145344211 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0726551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGT CGTGTTCGGC GTCAGGAGTT CGAGCCCCCA GCGCGTCGAC GGCGGCGAAG
CGCAAGCACG CTACCCCCTC AGCGAATCGT CGCGATTTCC TCGCTTTCGT CGCTTTTCTT
TCGTCCTCCT CGGCGCCTGC GTCGCGAGCG CAATTCTACA AGCGAAGCTT TCGCGAGCGA
TTCGAGACGT CCATCTCTTC CGCCACGCAC GATTATTCCT TCGAGTATCC GGAGGATTGG
AGCGCGGATA TCGTGTCGTT AAATGATGGC AAACTCTACG GCGTCGATAC TCGCTATAAG
TCGGACACAG GGAACGGTCA GCTCGCCGTG AGTGTTTTGC CTTTCGTCGG GGCGGACGGT
ATCAAAGACG CCGGGACGCC GGAGGATGTT TTGCAAAGAT TTGAAGAGCT CATCGGTGCC
TACTGGGAAC AAAATGGTTT TGGACAACCA GGACGAACGC CATCGTCAAC GTCTGTGTCG
ACGAAAAACG GTGTCGATTA TTATCTATAC GAACTCGTGT CGCCGCACAA CTTGATTTCC
GCGTGCATCG TCGAAGGTGA ACTGTATCTC ATGGTCGCCT CTTGCGGCGC TCGGTCTTGG
AAGAGCGCCG AAGGCGATCT ACGATCAATC GTTGATTCGT TCAAGGTGCC ACCATAG
|
|---|
| Protein sequence | MRASCSASGV RAPSASTAAK RKHATPSANR RDFLAFVAFL SSSSAPASRA QFYKRSFRER
FETSISSATH DYSFEYPEDW SADIVSLNDG KLYGVDTRYK SDTGNGQLAV SVLPFVGADG
IKDAGTPEDV LQRFEELIGA YWEQNGFGQP GRTPSSTSVS TKNGVDYYLY ELVSPHNLIS
ACIVEGELYL MVASCGARSW KSAEGDLRSI VDSFKVPP
|
|---|
| |