Gene OSTLU_30488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30488 
SymbolRPL7 
ID5000975 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp275872 
End bp277110 
Gene Length1239 bp 
Protein Length239 aa 
Translation table 
GC content61% 
IMG OID640416396 
ProductRibosomal protein L7, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001416891 
Protein GI145344757 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01310] 60S ribosomal protein L7, eukaryotic 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.655179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCG GCGAACGCGA AGCGACCGCG CGTGACGCGC GCATTCGCAC TCGTCACCGC 
GCGCGCGCGT CGTCGATCGG CGATGCGCGC GCGGTGCGCG CGACGGTGCA CGCGATTCGC
GCGATGCGTG ACCCTAACGC GCGGCGCGTC GATGCGTCGA TGGGAGGGCG ATGTCGGCGC
GGTCGCGGCG CGAGAGGGAG GGAGATCGAG GGCGATCGGT GGATGGATAT GTTTGCGACG
AACGATGACT GACGGAGGAC GCTTTCGCGC GCGCGACGTG CAGCCTTCCA CCGTTCCCGA
ATCCGTGCTG AAGAAGCGCA AACGCGACGA GCAGTGGGCG TCGCAAAAGG CGGCGGCCGC
GGCCGAAGCG AAGAAGGCGG GCGAGAAGAA GCGCGAGGAA ATTTTCAAGC GCGCGGAGAA
GTATGTCAAG GAGTACCGCG ACCAGGTGCG TGATGTGAGC GAGCGATGTG ACTGGGCGCG
ATGGGATTGT TTTAGGGTTC GTCGGGACGT CGCGGGACGT CGCGCGCGTC GCGCGGCGGC
CTTGGGATGA GCGCGACGCG TGTTGGATGC GCGCTTGCGA TTGATAGGCG GAGGCGACAT
TACGATGCGT CGCGTTGCGC TCGCGAACGC TCGATTGGAC GCGATGACTA ACGACGACGA
CGATGCGTCT GTTCGCGCGC GCAGGAAGCC GACCTCGTGC GTCTCAAGCG CGAGGCGCGC
GCCAAGGGTG GTTTCTACGT CGAACCCGAG GAAAAGCTCA TGTTTGTCAT GCGCTTGCGC
GGTTTGAATG ACATTCACCC GAAGACGAAG AAGATTCTCC AGCTCCTTCG CTTGCGTCAA
ATCCACAACG GGATTTTCAT GAAGGTGAAC AAGGCGACGC TCAACCAGCT TCGCAAGGTG
GAGCCGTACA TCATGTTTGG TTACCCGAAC TTGAAGACGG TTAGAGAGCT CATCTACAAG
CGTGGTTACG GTAAGGTGAA CAAGCAGCGC ATTCCGCTCA CGGATAACGC CGTGGTTGAG
CAAGCCCTCG GCGACAAGGG GATCATTTGC GTCGAAGACT TGATTCACGA AATTTACACC
GTCGGTCCGC ACTTCAAGGA GTGCGCCAAC TTTTTGTGGC CGTTCAAGCT CTCCGCCCCG
AACGGCGGGA TGACTGTGAA GAAGCAACAC TTCATCGAAG GTGGCATGGC TGGTAACCGC
GAAGATAAGA TCAACGCGCT CATCCGCCGC ATGAACTAA
 
Protein sequence
MPSTVPESVL KKRKRDEQWA SQKAAAAAEA KKAGEKKREE IFKRAEKYVK EYRDQEADLV 
RLKREARAKG GFYVEPEEKL MFVMRLRGLN DIHPKTKKIL QLLRLRQIHN GIFMKVNKAT
LNQLRKVEPY IMFGYPNLKT VRELIYKRGY GKVNKQRIPL TDNAVVEQAL GDKGIICVED
LIHEIYTVGP HFKECANFLW PFKLSAPNGG MTVKKQHFIE GGMAGNREDK INALIRRMN