Gene OSTLU_30392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30392 
Symbol 
ID5000757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp111968 
End bp113090 
Gene Length1123 bp 
Protein Length341 aa 
Translation table 
GC content63% 
IMG OID640416178 
Productpredicted protein 
Protein accessionXP_001416848 
Protein GI145344665 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5058] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGCACCGCT CGCGCGCTCG CGCGGTCGCC GCGATGTTCG CCTCGCGCGC GTCGGCGACG 
TCATCCTCGA CGTGGCGCCA CGCCGCGCGC GTCGTGAGCG ACGACGTCGG CGCGCTGGCG
GCGCAATTCG GATTTAAATT GCGCGCCGGT GAACACGCGA CGCCACGCGC CGTCGCGTCG
CGCGTGCGCG CGCCCGACGC CGCGCTGGAC GCGCGCGTGA CGCTCATCTA CGCGATAATC
ATGTTCGCGT TCAACTGGTT GTTACGGCGC GCCGTCGTCG AACCGCTAGC GGGACGACTG
ATGGGTTACG GCGCGCGCGG CGTCGGCGGC GCGCGCAAGG CGCGACGACG AAAGATGGAA
AAGTTCGCGC AGAGCGCGCT CGAGATGGCG ACGTACGGGA CGTTCACGAT CATCGGGTGC
GCGATAGTGC CTGGACAGCG ATGGTTCTGG CCGTCGAGCG AGTGGTGGAT CGGGGCACCG
GTGAAGACGC GGGCGACGGA GAGCGCGCTG CGGGCGTACT ATCTGGCGTA CGGGGCGCGA
TACGTCGCGG GGGCGGCCAA CGTGTTTCTC GAACATAAGC GGAAAGATTT TTGGGAGATG
CAATTGCATC ATTTTGCGAC GATCGGAGTG ATTTGGGTGT CGTACATCGT CGGTTGGACG
CGCGTGGGGG CGGTGATCAT GCTCGTGCTG GACCCGGCGG ACGTACCGTT GCACGCGGCG
AAGTGCGCGA AGTACGTCGG GGACGCGCGC GGGGATAAGA AATATCAACT CGCCGCCGAC
GTGTTGTTCG GTATTTTTCT CGTCATATTT TTCGTCATGC GACTGGTGAT GTATCCGTAC
GTGGTGTACT CCGTGCACTT CGAGGCGAGG CGGTATTTTA GCCCATCGAT CCCGTACTGG
CTGTGCGTCG CGTTGCTCTA CGTCATTCTC GGCTTGCAGG TGTATTGGTT TAAACTCATC
GTCAACGTCG TGCACAAGGT GCTAGCGACC GGAAACGCGG AGGACGTGAG GAGCGACGAT
GAAGACGAAC CAAATGGCGC CAAAGCGCAC CACGATTGAG CCGATGTGGC GCCACAGTAC
ATTATAAAAT TATTGCCGAG CCTCGCCGCG AAGGCGTCCC GTT
 
Protein sequence
MFASRASATS SSTWRHAARV VSDDVGALAA QFGFKLRAGE HATPRAVASR VRAPDAALDA 
RVTLIYAIIM FAFNWLLRRA VVEPLAGRLM GYGARGVGGA RKARRRKMEK FAQSALEMAT
YGTFTIIGCA IVPGQRWFWP SSEWWIGAPV KTRATESALR AYYLAYGARY VAGAANVFLE
HKRKDFWEMQ LHHFATIGVI WVSYIVGWTR VGAVIMLVLD PADVPLHAAK CAKYVGDARG
DKKYQLAADV LFGIFLVIFF VMRLVMYPYV VYSVHFEARR YFSPSIPYWL CVALLYVILG
LQVYWFKLIV NVVHKVLATG NAEDVRSDDE DEPNGAKAHH D