| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_2905 |
|---|
| Symbol | |
|---|
| ID | 5000558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 180387 |
|---|
| End bp | 181712 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | |
|---|
| GC content | 68% |
|---|
| IMG OID | 640415979 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416577 |
|---|
| Protein GI | 145344102 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGACGGGCGT GCGAGGCGAG GGCGGAGATC AAGGAGATCT TCATGCCGGC GCTGTCGTCG
ACGATGACGG AGGGGAAGAT CGTGAGCTGG TTGATGGGCG AGGGGGACGC GATCGGGAAG
GGGGACGCGG TCGTGGTCGT GGAGAGCGAC AAGGCGGACA TGGACGTGGA GTCGTTCGTG
GATGGAATCA TCGCGCACAT CGCGGTCGGG GACGGGGAGG TGGCGACCGT GGGAGCGCCG
ATCGCGTACG TCGTCGATAG CGAGAGCGAG ATCGAGGAGG CGAAGGCGAA GGCGGGCGGC
GCGCCGGCGC CGGCGCCGGC CGCGCCGGCG GCCGCGGCGC CCGCGCCGGC GCCGGCGCCG
GCGGCGCCCG CGCCGGCGGC GGCGGCGGCG GCGCCTGCAC CGGCGGCGCC GGCGGCGCCG
GCCGCGCCGG TGGCTTCCGG TCGCGTCGTC GCGACGCCGT ACGCGAAGAA GCTCGCGAAG
AAGCACAAGG TTGACCTCAA GACGCTCGCC GGTACGGGCT TGAATGGCCG CATCACCGCG
GTGGACATCG AGAACGCCGC GGGCTTGCCG CCGACGCCGA AGGCTGGCGC CGCGCCTGCC
CCGGCAGCGG CCGCGGCCGC CGCACCGAAG AAGGCGGCCG CCGTCGCGCC TCCGGCGCCC
GCCGGCACCG TCGTGCCGCT CTCGGGCATG CAAGCCGCCG TCGCGAAGAA CATGTTGCCG
TCTCTCTCAG TTCCGGTCTC CCGCATCGCG ATGAGCATCT GCACCGACGA GTTCGACAAG
TTGTACGCCA CTCTCAAGCC GAAGGGTGTG ACGATGACCG CCTTGCTCAC CAAGGCTGTC
GGCGTCGCGC TCGCGCAGCA CCCGATCATG TACTCCACCT ACCACGACGG TAAGGGCATC
GTGTACAACG ACAAGGTGAA CATCGCCGTC GCCGTTGCGC TCGATGATGG TTTGATCACG
CCAGTCTTGA ACGACACCGC CAACACCGAT GTCTACCAAC TCGGCCGCGA ATGGAGCGGG
CTCGTGAAGA AGGCGCGCAG CACTGGCTTG TCCCCGGCTG ACTACGCCGG CGGTAACTTC
ACCATCTCCA ACCTCGGCAT GTTCGGCGTC GACCAATTCG ACGCCATTCT CCCACCGAAC
CAAACCGCGA TCCTGGCCGT CGGCTCTTCC AAGAAGACCG TCGTCCCGGT TGGTGGCATG
ATTGGCGTCA AGAGCTTCAT GACGGTCAAC ATCGTCGCCG ACCACCGTCA CGTCAACGGT
AACGTCGCGG CTGACTTCGG CAAGACTTTG CGCGAAGTGA TCGAAAACCC TAGCAACCTG
ACGCTT
|
|---|
| Protein sequence | RRACEARAEI KEIFMPALSS TMTEGKIVSW LMGEGDAIGK GDAVVVVESD KADMDVESFV
DGIIAHIAVG DGEVATVGAP IAYVVDSESE IEEAKAKAGG APAPAPAAPA AAAPAPAPAP
AAPAPAAAAA APAPAAPAAP AAPVASGRVV ATPYAKKLAK KHKVDLKTLA GTGLNGRITA
VDIENAAGLP PTPKAGAAPA PAAAAAAAPK KAAAVAPPAP AGTVVPLSGM QAAVAKNMLP
SLSVPVSRIA MSICTDEFDK LYATLKPKGV TMTALLTKAV GVALAQHPIM YSTYHDGKGI
VYNDKVNIAV AVALDDGLIT PVLNDTANTD VYQLGREWSG LVKKARSTGL SPADYAGGNF
TISNLGMFGV DQFDAILPPN QTAILAVGSS KKTVVPVGGM IGVKSFMTVN IVADHRHVNG
NVAADFGKTL REVIENPSNL TL
|
|---|
| |