| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_14566 |
|---|
| Symbol | |
|---|
| ID | 5001134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 343104 |
|---|
| End bp | 346766 |
|---|
| Gene Length | 3663 bp |
|---|
| Protein Length | 1220 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 640416555 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416917 |
|---|
| Protein GI | 145344809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.122628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.061037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACA TCGGGGCGAA ACCGAGCGAG GACGGGGGTG GGAAGTGGGA GGCGAAGGCG
AGGGCGATCG AAGGCGACGC GACGACGGCG GGGGAGGACG AGAACGAGGC GACGTCGGAG
ACGAGCGGTG GGTCGGTGAC GCTCGATGAC GTCGCCACGG GGGGGGGGAG GACGAAAGTG
CGGTGCGCGT CGCTGACGGC GATGGACATC ATCGCCGCCG TGCCGGTGGA GAAGTGCGTG
GAGACGATGG ATTGGGTGGA GACGGGTCGC GAGACGAGAG ACGAGAGAGC GATGGCGTTC
GGCGCGGTGG CTTCGCGTCC GGTGAAGATA TCGGTCGATC ATGGGAAGAA GCGCGGTGGC
ATCGATAAGT CATTGGTAGT AGCGATGGAT TCGCGGTGGA TGGAGAGGAT GGAGACGCCC
GTGATCGTCG ATGAAGACGA GACGCGAAGA GCGCTGCGAA GAGCGATTCG CGAGGCGAGT
TTCTCGACAA ATTCGGAGAG CTGTTTGTTT CGATTGAACG AAGACGCCCT GGAGGCGCTG
GATTGCGTTG AGAATGACTT GCAGAAGAGA TACGACGTTG AGCGAGAGAG CGAAGGTTCG
AAAGAGTTTG AGTCGACGAC GAAGGTTGGT AAGTTGAAGG ATTTCATGAG TTTGTTTCCG
CGCCCACTCG AGACTTCGTT TGCGATGGAC GAGCCTTCTC TTCTCGCGTC TCCGATCACG
TTCTTGCTCT CGATGGCGAA AAAGATCAAA GTGCTGCCGT GGGAAAATGA GATAAAGATT
GATAGTTCAT GCAAGGAGTA CTTAAAGAAT CTCCTGTTTC AAGGAAGGAT CCCCGAGCCG
TCGACGAAAG ACCCTTTCCA AGCCGTGCCG ACGAAGATCG CTCCGTTGAT TTGTGAAGAC
ACCGCGCCAA GGTTCATGGA GAACGTGGAT CCAGATTCGA TGGATATTGC TCTGGACTCA
AAGTTGAAGA CTTTAACGAC GCCTGTGGAA GAGCACACCC TCGCGGTGTC GAATGATTTC
TCGTCCAAAG CCAAAGCGCA AATGACAAAG AAGCTTCTAA ACGTCGACGA CCGATTCGTC
ACCAAACCAA TGATTGTACC GAAGATCGAT GAAGAAGAAG AAGAAGATGC GAATGTTCGT
ACGGATCGCG CAATGCGAGA CGTGATTGCG AGTGTGCAAG CAGTAAAAGA CCGCGCGCCC
GCGTTATCCG AATGGAAAGT TGCTATCCCA AACGCCCTCG ATACGTTGGC GCGATTTCAA
GAAGAAGAGC ACACCGCGGC GGCAACTTTA TTTCGCGAAG CCGAGATGGA TAATGATGAT
CTCGATTGGA CTTGGGACGA CATGATGGAT AAGAACGATG AACCACGAAC GACGAAAGAA
CCGCCAAAGT CAGCGCCTGA AGCCATTCCA AAGCCACCGA CGCTGAGTGA ATCGCTGTCT
CTTTCGAAGA TTGAGAAACA CAAGGATGCG TGCTTGATCG ATTTCGTCGA GCTTGACCTT
GATCCAGAAC ACACATATGT GATCAAAGTG CTCGCGGAAC GTTATGGTTA CATATCGCAA
ATTTTACCTC TGGATATTCA GCGAGCTATT CCCCGATTTC AAGTCGGCGA ATCTACGGAG
CTCGCGCACG CAATGAAACA CTTTGCGAAT GAGTCGTCGT CAATCAATCG ACATTTGAAG
AACTTGCTGT GCTGTCAAAG TGCGGCGAAT TTAATTCATG TGTATGGAAT TCATCAAGCG
CACATTTTGA TGCGGAGTTA CGCTAAGGAT GAACAAGATT TATCAGACAT CAAGAGCCTC
GTCGAAAACA ACGACGTTGC CGTGGAGCGC GGCGAGTTTG ACGATCATCC CAAGTTGAGA
ATGATCAGAG CGTACATCGC AGATCTCATA GTGACTCAAT CGAAAATGCT CATTATCTTT
CCCGACGCGA TGGGTATACT CTCCATCGTG CGATTTATCA GTAAGCTTGG TACAAAAGCA
GTTCAGTTTG ATGGTAAGCA AGAGTTTAAA AATCTACACG AAGACGATGT TGAGGATTTC
GCTCGCGCGG TTACGCTCGC GACGGCCAAT GTACAAGTTT TAATCGCTCT CGAGGCTCAT
ATTGCTCATG AGGCATTTCC ATTGGAGCTA TTTTCGACGT GCGTTTATTA CGCTCCGTCG
CCGAATGCGC TTCAAGATCT TCATCTGCTT GGTTCTTCGC GCCACGCTGC AAATCGCTTT
GTGAGAGTGC TCGCCATGAA ACGGGGTGTC TCTATACCTA GTGAAGATCC AGAGCCTGCG
TCATCGGCGT TGCGTCATTC ACCGTACGTG GAGAATAATC AACATGCTGC AAGCGTCGTG
CGCGACGAAG ATCCCAATGT ATCGCCTCCT GTACAATTCG ATGGCGTTCC GAGGCACGTC
GTCGTGCTCA ACGTCGCTAG ACAGATTATC AAGGTACGAG AGCAACTATT TGGTCAAGTT
GAGCGAAACT TACTCGACGA CGGGTGCGAC GTGATTTTGC GAGAGTTTGG GATCGACGTT
GACGCATGCT TCACCGTCGG CAAGCAAGTT CACGCAGTGA TATTGATCGT GCCAGAATAT
TTTGTTGAAG GGTTACCGAC ACAAATTGAA CTTTTTTCGT TGGTGGAAGA TTTGATGGTT
GCTATGGCGC ACTCGTTTGT GTCAGGAACG ATGGTCTTTG AGGGTGATTT GGACTTTTTA
AACATTGCGC AAACGCTTGA TCGAAGAATC CATTCAGACG CCGCGCACAT GCATTTTTCC
ATCGATCTCA GGTACAGTCT CGAAGATGAA ACCGCGTCGA TGCTACATGA GATTCTGCAG
CCACAAGATG GTCGTTTCTC AGAATTTTCT GCGCCAATGC CAGAGAGCCG AACGATTGAA
GAAATGGAGT TGTGTGATAT GTTTCCTTTG CTCAATCCAA TCTCCGCATG CGCTCTATTG
GCGGATGAAT TCGTTTGCGA TGAACTCCAA CGCATTGGTA ATCTGTCTTC GAATACTAAG
GCGTACTTGC AACGCGATGG ATACCTTGGA TGCCCACTCG ATGTCTTCGG TGCCGAAGAG
CCGGCGAAGG ATGTACCACC GCCGTATTCG CCCCGCGGCG GAGCTGCGCA AGAACGAAGG
CAAGTCTTCA CGGAACGTCC AATCACAGAG TTTTACTCGC CCATTTCGAA GCGACCACGA
CTCGACGAAT GGGAGCTCGA ATCTTTGTCT TTAGATTCGC CGACAAACAC CGCGACTCCG
CATTATTACC AATCTTTGCA TCGGCGCAAT ATCGATACGC CGTCTCCAAT CGTGGACTTC
AAGACGTCTC CCACGTCGGC GCCGCGATCA CTCTTACGAT CACCGCCAGC GGCGTCACCA
CGAAGAGCGC CCCCTGTCAA TGTTGGCGCT GTCGGCGGTG GTCGACTCTG GCAACCGACC
CGGACGAGCG ACGGACCCTC GACGAGCGCA AACATGATTC TGGAGAAGCA TCGGCAGCAA
CCTGAACCGT CACTTGAGGA ATTCAATCAA ATGCTCGAGT CTTACCGAAT GCCCGCGCCT
CCCGAGCGTG GGCGAAGAAA CTCGACGCTT GATTGTTTCG ATTCGAACAG AGACTTAACG
CAGCACCGAT TCACGAGAAT ATCATCATCG CGAACGCAAC AATTTCCAAA CACTTGGAAA
TGA
|
|---|
| Protein sequence | MTHIGAKPSE DGGGKWEAKA RAIEGDATTA GEDENEATSE TSGGSVTLDD VATGGGRTKV
RCASLTAMDI IAAVPVEKCV ETMDWVETGR ETRDERAMAF GAVASRPVKI SVDHGKKRGG
IDKSLVVAMD SRWMERMETP VIVDEDETRR ALRRAIREAS FSTNSESCLF RLNEDALEAL
DCVENDLQKR YDVERESEGS KEFESTTKVG KLKDFMSLFP RPLETSFAMD EPSLLASPIT
FLLSMAKKIK VLPWENEIKI DSSCKEYLKN LLFQGRIPEP STKDPFQAVP TKIAPLICED
TAPRFMENVD PDSMDIALDS KLKTLTTPVE EHTLAVSNDF SSKAKAQMTK KLLNVDDRFV
TKPMIVPKID EEEEEDANVR TDRAMRDVIA SVQAVKDRAP ALSEWKVAIP NALDTLARFQ
EEEHTAAATL FREAEMDNDD LDWTWDDMMD KNDEPRTTKE PPKSAPEAIP KPPTLSESLS
LSKIEKHKDA CLIDFVELDL DPEHTYVIKV LAERYGYISQ ILPLDIQRAI PRFQVGESTE
LAHAMKHFAN ESSSINRHLK NLLCCQSAAN LIHVYGIHQA HILMRSYAKD EQDLSDIKSL
VENNDVAVER GEFDDHPKLR MIRAYIADLI VTQSKMLIIF PDAMGILSIV RFISKLGTKA
VQFDGKQEFK NLHEDDVEDF ARAVTLATAN VQVLIALEAH IAHEAFPLEL FSTCVYYAPS
PNALQDLHLL GSSRHAANRF VRVLAMKRGV SIPSEDPEPA SSALRHSPYV ENNQHAASVV
RDEDPNVSPP VQFDGVPRHV VVLNVARQII KVREQLFGQV ERNLLDDGCD VILREFGIDV
DACFTVGKQV HAVILIVPEY FVEGLPTQIE LFSLVEDLMV AMAHSFVSGT MVFEGDLDFL
NIAQTLDRRI HSDAAHMHFS IDLRYSLEDE TASMLHEILQ PQDGRFSEFS APMPESRTIE
EMELCDMFPL LNPISACALL ADEFVCDELQ RIGNLSSNTK AYLQRDGYLG CPLDVFGAEE
PAKDVPPPYS PRGGAAQERR QVFTERPITE FYSPISKRPR LDEWELESLS LDSPTNTATP
HYYQSLHRRN IDTPSPIVDF KTSPTSAPRS LLRSPPAASP RRAPPVNVGA VGGGRLWQPT
RTSDGPSTSA NMILEKHRQQ PEPSLEEFNQ MLESYRMPAP PERGRRNSTL DCFDSNRDLT
QHRFTRISSS RTQQFPNTWK
|
|---|
| |