| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_14486 |
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| Symbol | SDG3501 |
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| ID | 5000753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | - |
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| Start bp | 187075 |
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| End bp | 192423 |
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| Gene Length | 5349 bp |
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| Protein Length | 1782 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640416174 |
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| Product | predicted protein |
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| Protein accession | XP_001416870 |
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| Protein GI | 145344711 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5141] PHD zinc finger-containing protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00353687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.194877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGA CGTCGACGGC GCGGACGGAC GGCGACGACG GCGACGATGG ACGCGCGACG
CGCGCGCGAC CGACGAGGGG GGCGACGGAC GACGCGGACG ATTCGCCGGC GCCGCTCGCG
TCGTACGTCG CGGGAGACGT CGTGTTCGCG CGAGGCGTCG GCGCGCGAGG ACGGGAACCG
ATGTGGCCGG GCGTGATCGT GGACGTGGGG CGAGCGCCGG AGGCGGTGCG GAGGGATTTC
GCGGCGGCGT GCTGCTGCGT GATGTTTTAC GGGCCGAGCG GGACGCGGGG GCGGGAGAGG
GATTATTGCT GGGCGCCCGC GGAGGGGTTG ATGGCGTGGG CGCGAGGGGT GCGACGAGGG
TTGGACGCGC AGCGCGTGGC GAAGCGAATG CGACCGAGGG CGTTCGAGGA GGCGTGCGAG
GAGGCGCGCG AGGCGGCGGC GGCGGACGAG GACGACGTCG GGGCGACGGA GAGCGAAGGG
AGAGCCGACG ATCGGGGGGG GGACGGGAAG GGGCTCGACG GCGACGATGG CTCGCGCGAG
GGCGAGCGCG AAGACGAGGT GGGGGTGCTG GGATTACAGG ACTCGTTCGG GTTGCCGTGC
AGCGCGCCGG CGGAGCGGCT GGCGACGCGT CGGTGCGCGT CGTGCGGCGT GACGGATGAC
GAGTCGTTGC GATCGAAAAA CTCGAATGGG CTCTGCGCGC TGTGCAGAAA GTTGCACAAA
GAGGGTCAGT TCTGTCCGGT GTGCGATCGA GTGTGGCACT GGAGCGCGGG CGACGCCATG
GTGGGGTGCG ATCGATGCGA GATGTGGATT CATCGCGAAT GCGACGCCGT GGCGGCGGAG
GTGTTGGATA GAGAACAAAA CGGTGAGGAT GAGGATATTC CGTACGCGTG TCCGGTGTGT
AGAAGTAAAA CTCCCGAGCA GATCGCCGCG GAGGCGAGAC TCGCGGAGCA AGCGCGCGTC
GAGGCTGAAC GCAAGGCGCA GATTCGAGAG CGCAAGCGCT TGGAAAAACT TCTCAGCAAA
CCTCGAGTCG GTCGACCTTC AAAGGAGATG AAAGAGGCTA AAATGCTGCT GAGGCGCATG
CCAACGCTGG ATAAACTCCT AAAGGGTTCT TCCTCAGCCT CGGTGCGAGC GGGGACGATG
AAATCGCCGC ACGCAGTGTC GAAGAAGCAA AACACCGTGC CCAAACGACC GAAGAGTTCG
TGGCAGCTCT TCGCCGCGGA TTTCTTCCAA CAGTACAAAG ACGAAAACGG CGAAGATAAC
ATAGATTTCG CCGCGGTCTA TCGCGAGCAG GGTGCGGCGT GGCGCGAGAT TGACGCGTCA
GAGCGCGAGA GATACGAGGA GCTCGCCAGA GATGAGGCGG AGCGATTTAG AGAGATGATC
ACGGAGATGT TTGAGAGCGG CGAGCTCGAC GACCAGCAGC GAAAGCGTTA CGATAAAATC
TTGAACCCAG ACGCGCACGC AGCGAGGGTG AAGACGGAAC GAAACCCCGA TGCGAGCAAG
GCGTCGCGTC GCTCCAAGGC GGGTGATATT TCCAAGCTTC GCGACGGGAA CGAGTTGCCA
GAGACACTTG CGGTGATTTG TAACGGCGTG GCCGCAGACT ATTACACGCG CTTGAATCAA
GTGATGTGTC AATGCTCGGA TTGCGCAGGA ACGAACAAGT ACATGACGCC GACTGAGTTC
GAAAAGCACG CTGGCATGGG GCAAGCGAAA AAGTGGAAGG CGTCTTTGAG AATGATTGAG
CCGGCAAAGA TGCCCATAGG ACGTTTCTTG GACGGCAATG ATTTCAACGC TCGTAGGGAT
CAACATACCG AGGACGATGA AAATGCTTCG CTGGATTACG AAATCGTGCA AGTGAGTTGG
AGCGTCGATC GGTGTGCGGT GTGCGACGAT GAGCGCGACT TCGACTTTGA CCAGCTCATC
ACGTGCGAGG CGTGCGCGGT GACGGTGCAT CAGTCTTGCT ACGGTGTTCC AGACATACCA
GACGACACCG TCGGTTGGCT GTGTCGTTCG TGCGAGCACA CCGGTGGTGC AGTGAGCGAA
ACACCCTTGT GTTGTTTGTG TCCCGTCGCC GGCGGTGCGC TCAAACCGAC GACGATTCCT
TCGCTCTGGG CGCACAGCGC GTGCTGCCAA TGGATACCCG AGACCACCGT GCTTGATATC
GAGCGCATGG AGCCCATCGA TAACATCGCA AACATTCAAA AAGAACGCTG GTCGCTCTTG
TGCACGGTCT GTAAGCAACG CATGGGCGCG AAAATCCAAT GCTGTCATCC GGGTTGCTAC
ATCGCGTATC ATCCGTTGTG CGCGCGCGCG ACTGGTTTGT ACATGGATGC CAACGACGAT
GGCGACGATG ATGAATCGCC ATTACAGTTA CTGTCGTACT GTCATAGACA CTGTCGTGTC
GACGTCGAGC GCGCACAAAT TTACGCCGGC ACAGAGGGCT TGAAGATCGG CCAGGAGGGA
CGGCTGTTGG AGTGTGGTGC CAATAAGGAA CGAAAACGTA CCAAGGCGGA GATGCGCGCG
GAAACAGAAG AGCGCGAGAG ACGAGAAGCA TCCGCGACGC TCGCTGATGA GCCAGAGTTG
AGCTCAGACT CTGAGACAGA CTTCATGAAC TGCGCAAAGT TCCGTCGTTA CGAGCAACTT
GGTCATCCGA GGACGGAGGC GGACATCAAG GACGAAAACG AAGAAAATCC CGACGCTCCC
GGGTCAGGAA CGAAGAAGTA TCGAGTTCGT AAACGGGTCT TGCACGCGGA CGACGAGGAC
GAGAACGACG ACGACGACGA CGACGAGGAT GACGACGACG ACGACGACAT GACGGAACGT
GCTGATACAG ACATGGTGCA TACAAAAGAC GACGTCATCG CGCATCAACG CGTCGATACC
ATGGAAACTA CTGAAGACTT ATTGCAGGAT GACGACGACG ACGACGACGC AGAACTCTCG
ACAGATCTCG ACGTTGAGTA CGACGCCGAT CCAACAGACG ACGACGACGA CGACAATGCC
GAAGGCGGTA AAACAGACGC CGAGGATGCC GTGGAGGATG CCGATGCCAA ATTAGATCCC
TCAACGACGT TTCCGGAATC AAAGAGACGT AAAACCGTAT CAGAGCGTTC CGAGAGCTCA
CCTCAGAGTG CGACGTTGGC GCTGCAAGCA AAGTTGCCGG AAGCAAAGTA CCCGGCACTT
CCCGGCGGCT TACCCGTACC TGAAGGAAAC GTTCCGCGTC CGGATATTCC CGAAGTAAAC
ATTTACTGCA AGACGTTTAG AGGAATATTT AGACCAGCAG ATACGTTGAT CAAATGTCTC
TGCGGACGGT GCAGACGTGA GGCCGAAGCC ACGAACTCTG ACGCGACGAC TCTGTGGGAA
GCGAACAGAT GGGAGCAGCA CGCGGGTATG AAGCACACCA AGAAATGGAA AACGTCAATC
AGAGTCGTCG TCGACGATAA CGGTGGCGAG CAAGCTTTCG GTGATTGGCT TACCGATCAC
AATATCGTCG TGCTCGCGAA TACTGGAAAA ACGGCCAAGG TTGCGTCGAT GTCGGCAAAA
CCAAAAGCCC AACGGCCCAA AGCTTCGCGT ACGCACGCAC TCCTCGGTCT CGGTCTGGGA
ACATTTGAAG ACGACAAGTT GGAAGATAAG AGCGGCGAAG AGACTCGAGC AAGAGCTCTC
GTTGGACGCC GCGTGCAAAT CGACACCGGT ACCATTCTCG CACCGGACTG GAAAGACGGA
ACGATGATTG ACGTCACGAT AACGCGCACT GGCATTCGGT ATAAAGTCAT TTTCGACGAT
GGGACAGACT TGATGATATC GTTTACGCGT GATGCGCAAA ATTTGAAATT CGTCGATGGC
GAGGCACCGG ATTTGTCGTT TTTGCCTGAA GCCGCAAAAT TAAGCTCTGG CAAAAACACA
CAACTTGAGA CGCAACTGGC GATCGCCAAC GCACAATTTA CATCAGCAAA ACGACCGTCT
AATCCCGCAG ACCGCGCCAA GATCGCGGAA CTCGGGCGGC CGAAAAAGCC TCGTGAGAAA
GAGGCTTGGG TGCAGTGCGA GAACCCGTCG TGCGGGAAGT GGCGGCGCGT CCCTCAAAGT
TTTGCGGAGA AGTTATCTGC CGATGATGCC GACATGTGGA CGTGTCAGAA AAATCCTGAA
GCCGCATTTT CGGTGTGTTC AGTGCCTCAA GAGTTTGAGG ACGACGAGAT CGATCGACGC
ATCGCGCTTG GTGATAACGC TCCGTACATG GAGGGTTCAG ACGACGAAGA ATCGGAAGAC
GAAGACGCCG TTCGTACGCA CGTTCCCGAT GACTTGCCAG CGATGGTGAG CGTCGTATGC
AAAGGTGTAT CTGGGACATA TCACGTACAA ACGCGACGAA TCGAATGTCT GTGTCGAGCG
TGCGTCGATA GCGACCAAGG GCCGGTGTAC CACGAGAGGT CGCGGTTTGA AGCCCACATT
GGAGTGAAAG GACCGAAGAA GTGGAGCCAT CACATCAGAG TCGTCCTCAA TAACCGAACG
GTAATGTCGC TTGGAAAATG GCTCGAGGTG TGGGGATGCG AAATCCGGCG CGAAAAAACC
GTTGACCTGT CCGCCAAATC GCTCGGACAC CAGAGAAATC TCAGCCGCAA GCAGCTCGAA
GAAATTCAAG CCAACGTGTA CAAGCGTCTT GGATTGAATA AAAACGACAA AAACGCCAAG
GTTACGGGAC CACCGCCGAA GACAGGAAAA CGTCTGTACG TCGGACTTAC GCCGTACATC
GTGCGCGGGT CGCGAGGCGC CTTCAAGCGC GAGTTGATTG CTTCAAAAAA GTACACGCCC
GAAGAGTTTG CGGCGGTACA AGCGGAGCGC AAGGCTAGGG GCGTGAACGG CGCTTCGGAT
GATAAAGTCG TCGAACAGCA TGGGCTCACG ATGCGAGAGA AGCTCGAACA AATGACGGCG
TCGTACTCCG ATAGACTCAC GTTCGCCAAA TCCAACATAC ACGGATGGGG ACTGGTGGCC
AAGGTTTTCC ACAAGGCGGG TTCCATCGTC ACGCAGTTCA AAGGCGAGAC GTGTCGAAGC
ACCGTCGCGG ATCTTCGCGA AACCTTTTAC GAAGATAACG GAGTGGATTG CTACCTCTTA
AAACAAGACG ACGACACCGT CGTCGATTGC ACGTTTCAAG GAAACTTTGC GCGATTCACC
AATCACAGCT GCAACCCGAA CATGTACTCA AAAATCGTCA AAGTAGACGA CGCGAATCAC
ATCATCTTTT TCGCTCGAAC CGACGTTCGG CCCGGGGAAG AGCTGACGTA CAACTACAGA
TTCGAAAGCG AAGACGGCAA AGTGCCGTGC TATTGCGGCG CCGACAACTG TCGCGGTTAC
TTGTGCTGA
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| Protein sequence | MPSTSTARTD GDDGDDGRAT RARPTRGATD DADDSPAPLA SYVAGDVVFA RGVGARGREP
MWPGVIVDVG RAPEAVRRDF AAACCCVMFY GPSGTRGRER DYCWAPAEGL MAWARGVRRG
LDAQRVAKRM RPRAFEEACE EAREAAAADE DDVGATESEG RADDRGGDGK GLDGDDGSRE
GEREDEVGVL GLQDSFGLPC SAPAERLATR RCASCGVTDD ESLRSKNSNG LCALCRKLHK
EGQFCPVCDR VWHWSAGDAM VGCDRCEMWI HRECDAVAAE VLDREQNGED EDIPYACPVC
RSKTPEQIAA EARLAEQARV EAERKAQIRE RKRLEKLLSK PRVGRPSKEM KEAKMLLRRM
PTLDKLLKGS SSASVRAGTM KSPHAVSKKQ NTVPKRPKSS WQLFAADFFQ QYKDENGEDN
IDFAAVYREQ GAAWREIDAS ERERYEELAR DEAERFREMI TEMFESGELD DQQRKRYDKI
LNPDAHAARV KTERNPDASK ASRRSKAGDI SKLRDGNELP ETLAVICNGV AADYYTRLNQ
VMCQCSDCAG TNKYMTPTEF EKHAGMGQAK KWKASLRMIE PAKMPIGRFL DGNDFNARRD
QHTEDDENAS LDYEIVQVSW SVDRCAVCDD ERDFDFDQLI TCEACAVTVH QSCYGVPDIP
DDTVGWLCRS CEHTGGAVSE TPLCCLCPVA GGALKPTTIP SLWAHSACCQ WIPETTVLDI
ERMEPIDNIA NIQKERWSLL CTVCKQRMGA KIQCCHPGCY IAYHPLCARA TGLYMDANDD
GDDDESPLQL LSYCHRHCRV DVERAQIYAG TEGLKIGQEG RLLECGANKE RKRTKAEMRA
ETEERERREA SATLADEPEL SSDSETDFMN CAKFRRYEQL GHPRTEADIK DENEENPDAP
GSGTKKYRVR KRVLHADDED ENDDDDDDED DDDDDDMTER ADTDMVHTKD DVIAHQRVDT
METTEDLLQD DDDDDDAELS TDLDVEYDAD PTDDDDDDNA EGGKTDAEDA VEDADAKLDP
STTFPESKRR KTVSERSESS PQSATLALQA KLPEAKYPAL PGGLPVPEGN VPRPDIPEVN
IYCKTFRGIF RPADTLIKCL CGRCRREAEA TNSDATTLWE ANRWEQHAGM KHTKKWKTSI
RVVVDDNGGE QAFGDWLTDH NIVVLANTGK TAKVASMSAK PKAQRPKASR THALLGLGLG
TFEDDKLEDK SGEETRARAL VGRRVQIDTG TILAPDWKDG TMIDVTITRT GIRYKVIFDD
GTDLMISFTR DAQNLKFVDG EAPDLSFLPE AAKLSSGKNT QLETQLAIAN AQFTSAKRPS
NPADRAKIAE LGRPKKPREK EAWVQCENPS CGKWRRVPQS FAEKLSADDA DMWTCQKNPE
AAFSVCSVPQ EFEDDEIDRR IALGDNAPYM EGSDDEESED EDAVRTHVPD DLPAMVSVVC
KGVSGTYHVQ TRRIECLCRA CVDSDQGPVY HERSRFEAHI GVKGPKKWSH HIRVVLNNRT
VMSLGKWLEV WGCEIRREKT VDLSAKSLGH QRNLSRKQLE EIQANVYKRL GLNKNDKNAK
VTGPPPKTGK RLYVGLTPYI VRGSRGAFKR ELIASKKYTP EEFAAVQAER KARGVNGASD
DKVVEQHGLT MREKLEQMTA SYSDRLTFAK SNIHGWGLVA KVFHKAGSIV TQFKGETCRS
TVADLRETFY EDNGVDCYLL KQDDDTVVDC TFQGNFARFT NHSCNPNMYS KIVKVDDANH
IIFFARTDVR PGEELTYNYR FESEDGKVPC YCGADNCRGY LC
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