| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_12356 |
|---|
| Symbol | |
|---|
| ID | 5000965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 531539 |
|---|
| End bp | 531964 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640416386 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416974 |
|---|
| Protein GI | 145344924 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5122] Transport protein particle (TRAPP) complex subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0950552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.10707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCG GGAAGCTCCT CGCGGTGTGG CTCGTGAACA AGTCCGGGGG ACTGATCTAT
CACCGCGCGC TGCGCGAGGA CGCGCCGACG CTGGACGCGA ACGCGTGCCT GCGCCTGGCG
AGCGTGTGGC ACTCGCTGCA CGCGATCTCG AGGAAGGTGG CGCCGGTGAC GGGGTGCGCG
GGGATAGAGA GCCTGGAGTG CGATACGTTT GATTTGTATT GCTTTCAAGC GGAGACGGGG
ATGAAGATAT TCGTGACGAT GACGAAAGGG AGCGCGGACG CGAGCGGGAC GCTGCGAAGG
ACGCACCGGG CGTACTGCGA CTACGCGCTG AAGAATCCGT TTTACGAGGT GGAGATGCCG
GTGCGGTGTG AGTTGTTCGA CGTGGCGATC GCGGATATCG CGCGGTCGGT GAACGAGCGA
GGGTAG
|
|---|
| Protein sequence | MATGKLLAVW LVNKSGGLIY HRALREDAPT LDANACLRLA SVWHSLHAIS RKVAPVTGCA
GIESLECDTF DLYCFQAETG MKIFVTMTKG SADASGTLRR THRAYCDYAL KNPFYEVEMP
VRCELFDVAI ADIARSVNER G
|
|---|
| |