Gene OSTLU_12281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12281 
Symbol 
ID5001089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp7658 
End bp8458 
Gene Length801 bp 
Protein Length266 aa 
Translation table 
GC content57% 
IMG OID640416510 
ProductBASS family transporter: sodium ion/bile acid 
Protein accessionXP_001416821 
Protein GI145344609 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCA TGGGCATCAC GCTCACCCTT GATGACTTCA AGCGCGTTTT CTTAAAACCG 
CGGGTGATTG GGCTCGGATT TTTCGCGTGC TACGTCCTCA TGCCGGCGTT GGCGTTCGTC
ATCGGCAACG CGCTTGGTTT GAGCGGCCCG CTCCTCGCCG GTCTGATCCT AGTGGGTTCA
ATCAACGGCG GTCAGGCGAG CAACCTGTGC GCTTACATCG CCCGGGGTGA TGTCGCGCTC
TCTGTACTCA TGACTACCGC CACCACCGTC GGCTGCATCT TCATGACTCC GCTCATTTGC
AAACTCGCTT TGGGCGCCGT CGTCGACGTG GACGCCATGG GCATGGCGAT TTCCACCATC
CAAGTTGTTC TTGTGCCCGT CGTTCTCGGT TTGACTTTGA ACAAGTACGT GCCGAAGTTC
TGTCGAAGCG TTGAACCTTT CTCCCCTGTC GTCGGTGTTA CTGCCACCAT CATCCTCGTC
GGCGGAGCAG TTGCGAACTG CGCCGCCGGC ATTTTGGGCG CTGGTATGAC GTTGCAACTC
GCCGCTTTCA TGCTCCATCT CATCGGCGGC CTCGCCGGTT ATGGGATCAT GCGTGTGTTC
AAGTACAGTG AAACGACTTG TAGAACGGTC GCTATCGAAA CCGCGATGAA GTCGAGCGCC
TTTGGCTTTT TGCTTGCGTC TCTCCACTTC CCGGAGTACC TCGTGCGCGT GCCCTCGGCG
GTTTCCGTCG TTTGGATGGC GGTGTTAGGG AGCACCATGG CGGTGATCTG GCGATTCATT
CCGGTTCCGG ATGAAAACTA A
 
Protein sequence
MFSMGITLTL DDFKRVFLKP RVIGLGFFAC YVLMPALAFV IGNALGLSGP LLAGLILVGS 
INGGQASNLC AYIARGDVAL SVLMTTATTV GCIFMTPLIC KLALGAVVDV DAMGMAISTI
QVVLVPVVLG LTLNKYVPKF CRSVEPFSPV VGVTATIILV GGAVANCAAG ILGAGMTLQL
AAFMLHLIGG LAGYGIMRVF KYSETTCRTV AIETAMKSSA FGFLLASLHF PEYLVRVPSA
VSVVWMAVLG STMAVIWRFI PVPDEN