Gene OSTLU_48780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_48780 
Symbol 
ID5000444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand
Start bp130734 
End bp131960 
Gene Length1227 bp 
Protein Length408 aa 
Translation table 
GC content69% 
IMG OID640415865 
Productpredicted protein 
Protein accessionXP_001416318 
Protein GI145343366 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.034455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC GCGACGCGAA GTGTCGATTC GAACCGATCG ACGCTTACCG TCGCCCGCTC 
GGCGCGCGCG ACGTCCTGCT CGAGCTCACG CACTGCGGCG TGTGCCACAG CGACGTGCAC
GCCGCCGCCG GGCACCTGCG GCGCGCGCTC GGCGCGACCG AGTATCCAGC GGTGCCGGGC
CACGAGCTCG CGGGCGAGGT CGTCGCGATC GGCGACGGCG TCACGCGGTT CGCGATCGGC
GATCGAATCG GCGTGGGGTG CGTCGTGGAC GCGTGCCTGG CGTGCGAGGC GTGCGGCGCG
GGCGACGAGC ATCGGTGCGC GCGGGGGATG GTCGGGACGT ACGGCGACGA GGATAAGCAC
GGACGCGCGG GGACGTGGCC GGTGGGAGGG CGCACGATGG GAGGGTACGC GACGCATCAC
GTCGTGGACG AACGGTTCGG GATTCGAGTG CCGAAGGCGT ATCCGATGGA AGCCGCGGGA
CCGGTGATGT GCGCGGGGGT GACGGTGTAC GATCCGATGA AGCGATACGG CGTCGGCGCG
GGAAGCGCGG TCGGCGTGGT CGGATTGGGG GGGTTAGGGG TCATGGCGGT GAAGATCGCG
CGCGCGATGG GCGCGTCGGA GGTGGTGGTC TTCAGTCGAA GCGAGACGAA GAGGAGTTTG
GCGCGTCGAT GCGGGGCGAC GGCGTTCGCG AGCTCGGAGG ACGCGGACGC GATGCGTCGC
GCGCGAGGGA CGCTGGATTT AATTTTGAAC ACCGTGCCCG TGGCGCACGA TTACCTGCGA
TTTCAAAAGT TGCTCAAAAA ACGCGAACGC GGACGCCCGC GCGCGAAACA AGTCGTGCTC
GGTTTACACG CGGGACTCGT CTCGGGCATG GTGGCGCGCG GCGTGCGAGG CGAAAACAGC
CCGATCGTCG CCTCGGCGAT CGGCGGTATT CGCGCGACGC AGGAGGTGAT GGATCTGTGC
GCCGCGCACG GCATCGTCCC CGAGTTGGAA ATTTTACCCG TGTCGCGTCT GACGGAGATT
TACGAGGCGC TCGACTCTGG AAACGACTCC GGCGTGCGTT ACGTCTTAGA CATCGCCGCC
TTCGCCGCCG ACGTCCGCGC CGGGCGCGTC GACGCCCTTC GCACGTCCGG TCCTCCCAGA
CTCGTTCTCG ACGACCGCAA CGCGTTCGGG CCGCGCGGCG TCGTCCGCGA TCTCGCGCGC
GTCTTCTGCG GCTGCCACGT CTGTTAG
 
Protein sequence
MATRDAKCRF EPIDAYRRPL GARDVLLELT HCGVCHSDVH AAAGHLRRAL GATEYPAVPG 
HELAGEVVAI GDGVTRFAIG DRIGVGCVVD ACLACEACGA GDEHRCARGM VGTYGDEDKH
GRAGTWPVGG RTMGGYATHH VVDERFGIRV PKAYPMEAAG PVMCAGVTVY DPMKRYGVGA
GSAVGVVGLG GLGVMAVKIA RAMGASEVVV FSRSETKRSL ARRCGATAFA SSEDADAMRR
ARGTLDLILN TVPVAHDYLR FQKLLKKRER GRPRAKQVVL GLHAGLVSGM VARGVRGENS
PIVASAIGGI RATQEVMDLC AAHGIVPELE ILPVSRLTEI YEALDSGNDS GVRYVLDIAA
FAADVRAGRV DALRTSGPPR LVLDDRNAFG PRGVVRDLAR VFCGCHVC