| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_36409 |
|---|
| Symbol | |
|---|
| ID | 5000082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 135340 |
|---|
| End bp | 136752 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640415503 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416079 |
|---|
| Protein GI | 145341985 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1204] Superfamily II helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.306312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG AGATTCAGCG GTTGTTGGAC ATGCGCGATC CGGCGGCGGC GTATCCGCTC
GCGAGGTCGA TGCGGCGAGA GATTACGCTG CACGTGGGGC CGACGAACAG TGGGAAGACG
TACGCCGCGA TGCAGCGGTT GAAGCGGGCG GGGAGTGGGG TGTATTGCGC GCCGTTGAGG
TTGCTGGCGT GGGAGATTTC AGAGAATATG AATAGAGAGG GGGTGCCGTG CACGCTCGTC
ACGGGGCAGG AGCGGCGCGT GGCGCCGAAC GCCTCGCACG ATAGTTGCAC GGTGGAGATG
TCGGATCTGT CCAAGGTCAT GGACTGCGCG GTGATTGATG AGATACAACT GCTGAGTGAC
CCACTTCGAG GGTACGCGTA CACGCGCGCG TTGCTGGGGT TGCCCGCGTT GGAGCTGCAC
CTGTGCGGCG ATCCTCGCGT GGTGCCGTTG GTGCGACGCA TCGTCAAGTC GACGGGGGAT
TTATTAGTGG TCAAAGAGTA CGACAGATTG TCGCCGTTAG AAGTCTCGCG CGATATCGTC
AAGAGTGTGA AGGACGTGCG CAAGGGTGAC GCGTTCGTAG CTTTCAGCCG AAGCGCGGTG
TACGATTTGA AGCGCGAGTT GGAACAGAAA TCGCCGCACC GAGCGTGCGT CATTTATGGA
GGTTTGCCGC CGGAGACGCG CTCGAGGCAA GCTGAGCTGT TTAACAAGCC CGATAGCGGC
TACGACGTTC TCATCGCGTC CGATGCGATC GGGATGGGCT TGAATTTGAA CATCAAGCGC
GTGATTTTTA CGACAATGTC CAAATTCGAC GGAAGCGAGA TGCGCAAACT GGCGGGGCCC
GAGACGAGAC AAATCGCCGG TCGTGCGGGA CGATACGGTC TCAACTACGC GGACATGGGG
ATCGTGACGA CGACGAAAAA GGCTGACTAC GACTTGCTCG CGGCGGCCCT TGAAGGCGAG
CTGGAGCCGT TGACTCAAGC CGGTCTCGCG CCGTCGCTCG AGCAAGTAGA AGAGTACTGC
GAGCTTCGCC CGGAGGCGGG TCTCGTCGGC GCCTTGCAAG CGCTGAGCGA CTCGGCCAAG
TTGGCGCCGC ACTTTCGCAT GCGAGATATG GAAGAATCCA TCGCCGTGGC GAAATTGTTG
GAAAAGCTTC CGCTCACGCT GGCTGATCAT TTCTTGTTTT CCATCGCGCC AGTCGACATT
CGCGATTCCA TGGTCGTGAA CGCGATGATG AAGTTTGCGC GCGTGTTTTG CACGCACGGA
CGCGCAGGCG TGCGTCTGAT TTCGCTGCCT CCCGCGCGCA CGCCCACGGC GCCGCATGAG
TTACAAAAGC TTGAAAGCGC GCACAAGTGC CTCGACTTGT ACTTGTGGCT CGCCAGACGT
CTGCCGAACG CATTTCCAGA AGAGAACCTG GCC
|
|---|
| Protein sequence | MTPEIQRLLD MRDPAAAYPL ARSMRREITL HVGPTNSGKT YAAMQRLKRA GSGVYCAPLR
LLAWEISENM NREGVPCTLV TGQERRVAPN ASHDSCTVEM SDLSKVMDCA VIDEIQLLSD
PLRGYAYTRA LLGLPALELH LCGDPRVVPL VRRIVKSTGD LLVVKEYDRL SPLEVSRDIV
KSVKDVRKGD AFVAFSRSAV YDLKRELEQK SPHRACVIYG GLPPETRSRQ AELFNKPDSG
YDVLIASDAI GMGLNLNIKR VIFTTMSKFD GSEMRKLAGP ETRQIAGRAG RYGLNYADMG
IVTTTKKADY DLLAAALEGE LEPLTQAGLA PSLEQVEEYC ELRPEAGLVG ALQALSDSAK
LAPHFRMRDM EESIAVAKLL EKLPLTLADH FLFSIAPVDI RDSMVVNAMM KFARVFCTHG
RAGVRLISLP PARTPTAPHE LQKLESAHKC LDLYLWLARR LPNAFPEENL A
|
|---|
| |