Gene OSTLU_30150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30150 
SymbolClpR3 
ID5000326 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand
Start bp634963 
End bp636111 
Gene Length1149 bp 
Protein Length308 aa 
Translation table 
GC content49% 
IMG OID640415747 
Productchloroplast Clp protease, subunit of ClpP peptidase complex 
Protein accessionXP_001416446 
Protein GI145343690 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGGCGTAAA GCATGAAATC CACTTACGTG GTTTCATCTG TCACTTGCTC TGCGCGTGCT 
GCCCGCGTCG CGCACGGAGA CCACTTGCGA TCTGCCGCCA ACAGGCGAGT GGGAGCGAAA
ACAGCTCCCC AGCACCTTGA ACGTGTAACG ACGACGTCGC GACGTCGCCC TCGGACCATC
CACGCGCACG GAAGACCGGG GGCGGCCATC AGTAATGCTT ATGCAAGTCC ACAAGCTTCA
AACTCACCGG CTAGCGCGAA TCCGGGGACC TCGTATAGTG AACACAAACC AAAAACACCG
CCACCTGACC TCCCCTCCTT GCTTCTGGAC AGCCGAATCG TCTACATAGG CATGCCGGTG
AGATACATGT TCAATAACTT GAATTGGGAA ACTAACTACG CATTATTGAT AGCTTGTTCC
TGCTGTTACT GAGCTCATTG TGTCAGAACT CCTGTATCTT CAATACACCG ATCAAAAGAA
GCCGTGCTAC ATCTACATCA ACTCGACTGG TTGTACCCGC GCCGATGGCG AGGTTGTCGG
TTTTGAAACC GAAGCCACCG CAATTTTCGA CACGATGAAG TATATTGGCA ATGAGGTGAG
GTCTTAATTT CGTTTTTAAC GACTTTTCTC ACATAGATAT AGATTTATAC AGTTGGTACC
GGTGTTGCAA TAGGGCAAGC ATGCATGCTT CTATCTGCAG GTGATAAAGG TAAAAGGTAC
ATGACACCTC ATGCGACAGC AATGTTGCAC CAACCTCGCG TACCTTCGAC TGGAGAGCGA
CAGGCTACCG AACTAAACAT CAAGTGGCGC GAAACACTTG CTCAGAAGAA GTCTCTGTTG
GATATTCTCA GTCAGACAAC AGGTCATTCA GTGGCCAAGT TAGATAAGGT GAGCTTTTCG
CTACAATGAT TTTCGTTCAT TATTAAAATT TCTTGCGAAT AGGATATGCA ACGCCCGTTG
TACATGACGG CTAAGGACGC GATTGAATAC GGAATCGTTG ATAAAGTTAT TGAGCGCGAA
TCAAACGCGA TCGCGGACGT GATGAGCGCG TCGGCGTGGG ATAGTGCCGC TGGTCTAGTT
CAGAAGCCCG TCTAGACAGT TTAGTGCGAG TAGGGCTTAC TATAATCTCA TAATTCGAAC
TTCTTTGTA
 
Protein sequence
MKSTYVVSSV TCSARAARVA HGDHLRSAAN RRVGAKTAPQ HLERVTTTSR RRPRTIHAHG 
RPGAAISNAY ASPQASNSPA SANPGTSYSE HKPKTPPPDL PSLLLDSRIV YIGMPLVPAV
TELIVSELLY LQYTDQKKPC YIYINSTGCT RADGEVVGFE TEATAIFDTM KYIGNEIYTV
GTGVAIGQAC MLLSAGDKGK RYMTPHATAM LHQPRVPSTG ERQATELNIK WRETLAQKKS
LLDILSQTTG HSVAKLDKDM QRPLYMTAKD AIEYGIVDKV IERESNAIAD VMSASAWDSA
AGLVQKPV