| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_30030 |
|---|
| Symbol | ClpP5 |
|---|
| ID | 5000423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 441951 |
|---|
| End bp | 443376 |
|---|
| Gene Length | 1426 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 640415844 |
|---|
| Product | chloroplast Clp protease, subunit of ClpP peptidase complex |
|---|
| Protein accession | XP_001416147 |
|---|
| Protein GI | 145342132 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.160952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCGAATACT CAGCCACAGT TCCTTCGTCC GTCGTTTGAC GCGACAGCTG TTTCTCAGGT
TCAACATCCT GCACTTCTTG CATCAACTCA ACAAGGTTGG CTGCATACTC GCCGAACTCT
TCGCGACAGG ATCCCCGAGT TATTTTTCAC AATGCAAGCT CGATCTTTAT ACCGTTTCAA
GACGCAGCAC TCTAGGTACG CTATAGGTGT AGTTTTCGTC GTTCGAGCAT ACGGTCGTGA
GCGGTGCACC CCTTTTGTTG GCAAATTAAA GGCGGCACAC GCGTGAAACC CTACAGGGGA
AGTACTAACG GCTCTTTTTT GTTTTCGCTC CCAGTGGCGT TGGATCATCA TCTGCGCGCA
TAGATCGCTC AAAGCACCAA GGCTTACAGA CTCGAGTTAA AGCAGGGCTT TATGTCAGCA
ACCAACAGGG CAAGGGTCCA TCGCCTATTG TGCTGGAAAG GTTTCAAAGC GTTGCCAGCC
AACTCATGTC GCAGCGTATT ATTCGACTCG GCGGTGCAGT AGATGACGAT AGCTGCAACT
TAATCGTAGC TCAACTTCTT TGGTTAGATG CTGCAGATCC CACGAAAGAC ATTACACTGT
ACGTAAATTC ACCTGGGGGC TCCGTTACAG CAGGAATGGC GGTGTTTGAT ACAATGCGAC
ATATTCGTCC CAACGTTTCT ACGGTTTGTG TGGGTCTTGC GGCATCTATG GGTGCGTTTC
TTCTTGCTTC TGGTCATCCG GGCAAAAGAT ACAGCCTTCC GAACAGTAGG ATCATGATTC
ACCAACCTCT TGGTGGTGCA CAAGGTCAAG CCGCAGATAT TGAGATACAA GCTAACGAAA
TCATGCATCA TAAGTCAACG CTGAACGGCT ACCTCGCTGA ATTTACCAAG AAACCACTTG
AGACGGTGAT GGAAGATACC GATCGAGACT TTTTCATGTC GGCTAAGGAA GCCGTTGAGT
ATGGCCTTAT AGACGCTATC ATTGAGCACC CCACAGACGT GGCTGTCAAG GCTTCGGGCA
TACCTATGTA TGCGTCTGGA CTGTAAGACG ACTGCTTCGT CTCGTTTTCC ATTGTAAAAG
TGACTCTGGT TATAATGTAT GAGTCGGCGT GTAGAAGAAA AGCGATTATC CGACGACACG
TCATTTTTCA TGTTGTTCCA GCGAGAGGTA AAAATACATC GCACCAGAAC GCACCTCGTC
TATGTTGGAC GTTCCTTAGC GACAATTTGT TATGAACACC AACCAACGAA TCCTCAGATT
TGCAAACATC TCGCGGCATG CGACACGACA ACCTCTACAC TCAAGGTTTG CGTGGCAATC
AGCCTCACTT GGGCTAGAGT TCCAGTCTCG AACGGTAAGG TTGGTGTACA CTACGGCCGA
AGCTTGGCGA GTTTTAGGGA GCTTCAGATA GGTCGTAGAC TTCATG
|
|---|
| Protein sequence | MQARSLYRFK TQHSSGVGSS SARIDRSKHQ GLQTRVKAGL YVSNQQGKGP SPIVLERFQS
VASQLMSQRI IRLGGAVDDD SCNLIVAQLL WLDAADPTKD ITLYVNSPGG SVTAGMAVFD
TMRHIRPNVS TVCVGLAASM GAFLLASGHP GKRYSLPNSR IMIHQPLGGA QGQAADIEIQ
ANEIMHHKST LNGYLAEFTK KPLETVMEDT DRDFFMSAKE AVEYGLIDAI IEHPTDVAVK
ASGIPMYASG L
|
|---|
| |