Gene OSTLU_14089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_14089 
Symbol 
ID5000415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand+ 
Start bp84777 
End bp85397 
Gene Length621 bp 
Protein Length206 aa 
Translation table 
GC content56% 
IMG OID640415836 
Productpredicted protein 
Protein accessionXP_001416066 
Protein GI145341958 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5143] Synaptobrevin/VAMP-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CCGCGTTAAC GCTATGGAAA TCTAACGGCG CCGACGACGA TCCTAGCTTC 
CTCGGCGGCG CCACGGACGT CGCTGAATTT GGATTCTTCC AGCGCGCCTC GGTGCGCGAA 
ATGTTGATCT TTATCTCTCG AACCGTCGCG AAACGCACGC CTCTGGGCGC GCGACAGAGC 
GTGCAGCAGG ACGCGTACAT GGTGCACGTG TCGAATAAGT CGGGCCTGGT CGCCGTGGCG 
GTGATGGATG AGGAATATCC GAGCAGAAGC GCGTTTTGCG TGCTGGGCAA GATGATGGAC 
GAGTACGAGA GCGCGAACGG CGAAGGCGCG AACGAGGCGT GGCGCGCGGT GCGCGAGGAT 
AAACCCGAGG GAGGACGCGC GAGTGAGATG CTGGAGGAAA TGCTGGTGAA GTATCAAGAC 
CCGAGCGCGG CGGATAAGAT TTTGAAGATT CAGAGAGAGT TGGACGACAC CAAGGTGGTG 
TTGCACAAAA CCATCGATAG CGTGTTGGCG AGAGGGGAAA AGTTGGATAA TTTGGTGGAT 
AAGAGCACTG ATCTATCGCT GGCGAGTCAG ATGTTTTACA AACAGGCGAA GAAGCAGAAT 
CAGTGCTGCA CGATGATGTG A
 
Protein sequence
MKVTALTLWK SNGADDDPSF LGGATDVAEF GFFQRASVRE MLIFISRTVA KRTPLGARQS 
VQQDAYMVHV SNKSGLVAVA VMDEEYPSRS AFCVLGKMMD EYESANGEGA NEAWRAVRED 
KPEGGRASEM LEEMLVKYQD PSAADKILKI QRELDDTKVV LHKTIDSVLA RGEKLDNLVD 
KSTDLSLASQ MFYKQAKKQN QCCTMM