Gene OSTLU_12187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12187 
Symbol 
ID5000102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand
Start bp117540 
End bp118070 
Gene Length531 bp 
Protein Length176 aa 
Translation table 
GC content57% 
IMG OID640415523 
Productpredicted protein 
Protein accessionXP_001416314 
Protein GI145343357 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.17047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGCA TGGAAAAAAC CATGGACGCC ATCGCGAACG ATTTCAGCAC CGTGCGCACG 
GGACGGGCGA ACGCGGCGGT GTTGGACCGA ATCGAGGTGG ATTACTACGG AGCGCCGACG
CCGCTGAAGA CGATCGCGAA CGCGTCGACG CCGGACGCGC AGACCATCAC CATTCAACCG
TTCGATAAGA GCGCGATTAA GGATATCGAA CGCGCGATTA ATGAATCTGA TCTCGGGATG
AACCCGTCGA ACGATGGGAA CATCATTCGA TTGAACGTGC CGCCGTTGAC GGCGGAGCGG
AGAAAGGAAC TCGCGAAGCT CGTGAGTAAA CTCGGCGAGG ATGGAAAGGT TGCGCTGCGC
AACGTGCGAC GGGACGCGAT GAAGGCGTAC GAAAAGTTGG AAAAGGCGGG GTCGTTCGGT
GAGGACGAGA TCGCAAAGTT GAAGAAGAGC ATGGAGGATT TGACGGCGTC GTACGTGAAG
AAGGTGGACG AGCTCACCAA GGCGAAGGAG ACCGAGTTGC AAAAAGTTTA A
 
Protein sequence
MERMEKTMDA IANDFSTVRT GRANAAVLDR IEVDYYGAPT PLKTIANAST PDAQTITIQP 
FDKSAIKDIE RAINESDLGM NPSNDGNIIR LNVPPLTAER RKELAKLVSK LGEDGKVALR
NVRRDAMKAY EKLEKAGSFG EDEIAKLKKS MEDLTASYVK KVDELTKAKE TELQKV