Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_12187 |
Symbol | |
ID | 5000102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 117540 |
End bp | 118070 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | |
GC content | 57% |
IMG OID | 640415523 |
Product | predicted protein |
Protein accession | XP_001416314 |
Protein GI | 145343357 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.17047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGCA TGGAAAAAAC CATGGACGCC ATCGCGAACG ATTTCAGCAC CGTGCGCACG GGACGGGCGA ACGCGGCGGT GTTGGACCGA ATCGAGGTGG ATTACTACGG AGCGCCGACG CCGCTGAAGA CGATCGCGAA CGCGTCGACG CCGGACGCGC AGACCATCAC CATTCAACCG TTCGATAAGA GCGCGATTAA GGATATCGAA CGCGCGATTA ATGAATCTGA TCTCGGGATG AACCCGTCGA ACGATGGGAA CATCATTCGA TTGAACGTGC CGCCGTTGAC GGCGGAGCGG AGAAAGGAAC TCGCGAAGCT CGTGAGTAAA CTCGGCGAGG ATGGAAAGGT TGCGCTGCGC AACGTGCGAC GGGACGCGAT GAAGGCGTAC GAAAAGTTGG AAAAGGCGGG GTCGTTCGGT GAGGACGAGA TCGCAAAGTT GAAGAAGAGC ATGGAGGATT TGACGGCGTC GTACGTGAAG AAGGTGGACG AGCTCACCAA GGCGAAGGAG ACCGAGTTGC AAAAAGTTTA A
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Protein sequence | MERMEKTMDA IANDFSTVRT GRANAAVLDR IEVDYYGAPT PLKTIANAST PDAQTITIQP FDKSAIKDIE RAINESDLGM NPSNDGNIIR LNVPPLTAER RKELAKLVSK LGEDGKVALR NVRRDAMKAY EKLEKAGSFG EDEIAKLKKS MEDLTASYVK KVDELTKAKE TELQKV
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