| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119643 |
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| Symbol | Psma1 |
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| ID | 5000161 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | - |
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| Start bp | 684424 |
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| End bp | 685465 |
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| Gene Length | 1042 bp |
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| Protein Length | 236 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640415582 |
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| Product | alpha-type C2 proteasome subunit |
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| Protein accession | XP_001416462 |
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| Protein GI | 145343723 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCGCA ATCAATATGA TCAGGTAACT ATCTAAAATT GACGGCGCTC TCGTCTCTGA
ACGACGTTCC TCTCGCTGAC GTCGTTGACC TACAGGACAT GTTGACATGG AGTCCACAGG
GACGCTTGCA TCAGGTGGAG TGTAAGTCTT TCACATATCT TCTATGAGTG ATGGACCTCA
AATGATCAAA AGATGCGATG GAAGCCGTGA AGCAAGGAAG TACCGTTGTA GCTTGTGGTG
TATGTGTCTA AACTTTCTGA AACTTGCTAC AAAGTTTGTT AATGGTGATC GCAGAATAAA
AAGTGCGCTG TGCTCGCTGC TTTGAAGCGC AAACAATCGA AGCTATCTTC GATGCAAGAA
AAGATTTTCG CAATAAACAC ACGAGTGGGC GTCGCAGTGT CAGGTCTTTC AACAGATGGG
GCAAAGTTAG TAAAACTTCT TCGCGAGGAA AGTACAAGAG AAGAGTTTGT GTACGGTCGA
AGCGCATGCC CTGGTCGGCT CGCTGCAGCA GCTTCAAAAT CATTACAGGT GAATTGATCA
CAGGTAGACT TGCTTTCTCT TATTGTTTTG AATAGATCTC TATGCGAAAA AGCTCAGGAC
GGCCTTGTGG AGTCGGTTTG GTACTTGTTG GTTCAAGTGA ACAGCTCGGT TGTCAAATCT
TCCAAACTTG TCCTAGTGGT GAAGTTCACC AAATGTCGTG CACTGCAATA GGTATGAGCC
AGTCAAGCAT TCGAATAATC CAAATAAGAC GTTGATGTGT GAATTAGGTG GGAGGTCACA
GTCAGCACGA ACATATCTTG AAAAAAATAT GGAGGCCCTC GAGACTGCCA GCGTTGACGA
GGTACGTTTG TTGTACGCTT TGCATTACTC CGTGAATGAT GTAGATGGCC AGATGATCAT
GATTGCACTG AGAGCGCTAA ACGAATCGAA TGTAGATGCT AGTGATCTCA CATCGGACAA
ATGCGAAGTG GCGATAGTAG AGCTAAACAC TTATACGTTG AAAAGCGCGG CAGAAGTGAC
TACCCTGTTG ACAAATCTTT AA
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| Protein sequence | MFRNQYDQDM LTWSPQGRLH QVEYAMEAVK QGSTVVACGN KKCAVLAALK RKQSKLSSMQ
EKIFAINTRV GVAVSGLSTD GAKLVKLLRE ESTREEFVYG RSACPGRLAA AASKSLQISM
RKSSGRPCGV GLVLVGSSEQ LGCQIFQTCP SGEVHQMSCT AIGGRSQSAR TYLEKNMEAL
ETASVDEMIM IALRALNESN VDASDLTSDK CEVAIVELNT YTLKSAAEVT TLLTNL
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